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L2_031_124G1_scaffold_244

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_031_124G1_scaffold_244_1
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..262
DNA (261bp) protein (87aa)
tRNA/tmRNA (uracil-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011, ECO:0000256|SAAS:SAAS00211003}; EC=2.1.1.35 {ECO:0000256|HAMAP-Rule:MF_01011};; tRNA (uracil(54)-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; tRNA(m5U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; tmRNA (uracil(341)-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; TaxID=888828 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae ATCC 33392.;"
tRNA/tmRNA (uracil-C(5))-methyltransferase n=2 Tax=Haemophilus parainfluenzae RepID=I2IYE6_HAEPA
tRNA (uracil-5-)-methyltransferase
L2_031_124G1_scaffold_244_2
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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244..1011
DNA (768bp) protein (256aa)
Ribosomal RNA small subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073131}; EC=2.1.1.242 {ECO:0000256|HAMAP-Rule:MF_01523, ECO:0000256|SAAS:SAAS00073130};; 16S rRNA m2G1516 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; rRNA (guanine-N(2)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01523}; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae (strain T3T1).;"
Ribosomal RNA small subunit methyltransferase J n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W2S7_HAEP3
SAM-dependent methyltransferase
L2_031_124G1_scaffold_244_3
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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1005..1445
DNA (441bp) protein (147aa)
Positive regulator of sigma(E), RseC/MucC n=2 Tax=Haemophilus parainfluenzae RepID=I2IYH0_HAEPA
Positive regulator of sigma(E), RseC/MucC {ECO:0000313|EMBL:EIJ31630.1}; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae HK2019.;"
RseC protein involved in reduction of the SoxR iron-sulfur cluster
L2_031_124G1_scaffold_244_4
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1545..2816)
DNA (1272bp) protein (424aa)
peptidase E (EC:3.4.13.21)
Aminobenzoyl-glutamate utilization protein A n=1 Tax=Haemophilus haemolyticus M21127 RepID=F9GVB1_HAEHA
Aminobenzoyl-glutamate utilization protein A {ECO:0000313|EMBL:EGT75659.1}; TaxID=1028804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21127.;"
L2_031_124G1_scaffold_244_5
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2887..4182)
DNA (1296bp) protein (432aa)
Putative C4-dicarboxylate transporter n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9H154_HAEHA
Putative C4-dicarboxylate transporter {ECO:0000313|EMBL:EGT79112.1}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
C4-dicarboxylate transporter
L2_031_124G1_scaffold_244_6
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4200..4904)
DNA (705bp) protein (235aa)
Peptidase E {ECO:0000256|HAMAP-Rule:MF_00510, ECO:0000256|SAAS:SAAS00013387}; EC=3.4.13.21 {ECO:0000256|HAMAP-Rule:MF_00510, ECO:0000256|SAAS:SAAS00013385};; Alpha-aspartyl dipeptidase {ECO:0000256|HAMAP-Rule:MF_00510, ECO:0000256|SAAS:SAAS00085848}; Asp-specific dipeptidase {ECO:0000256|HAMAP-Rule:MF_00510}; Dipeptidase E {ECO:0000256|HAMAP-Rule:MF_00510}; TaxID=1028806 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21639.;"
pepE; Peptidase E (EC:3.4.13.21)
Peptidase E n=1 Tax=Haemophilus haemolyticus M21639 RepID=F9H707_HAEHA
L2_031_124G1_scaffold_244_7
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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5027..5227
DNA (201bp) protein (67aa)
Putative positive regulator of the sigmaE transcription factor n=1 Tax=Haemophilus haemolyticus M21639 RepID=F9H4C8_HAEHA
Putative positive regulator of the sigmaE transcription factor {ECO:0000313|EMBL:EGT82473.1}; TaxID=1028806 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21639.;"
positive regulator of the sigma(E) transcription factor
L2_031_124G1_scaffold_244_8
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5333..6649)
DNA (1317bp) protein (439aa)
Putrescine/proton symporter: putrescine/ornithine antiporter n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W2S9_HAEP3
putrescine/proton symporter: putrescine/ornithine antiporter
Putrescine/proton symporter: putrescine/ornithine antiporter {ECO:0000313|EMBL:CBW14668.1}; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae (strain T3T1).;"
L2_031_124G1_scaffold_244_9
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6753..8915)
DNA (2163bp) protein (721aa)
Ornithine decarboxylase isozyme, inducible n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W2T0_HAEP3
ornithine decarboxylase isozyme, inducible
Ornithine decarboxylase isozyme, inducible {ECO:0000313|EMBL:CBW14669.1}; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae (strain T3T1).;"
L2_031_124G1_scaffold_244_10
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9166..9360)
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=3 Tax=Haemophilus RepID=F9H703_HAEHA
Uncharacterized protein {ECO:0000313|EMBL:EGT80259.1}; TaxID=1028806 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21639.;"
hypothetical protein
L2_031_124G1_scaffold_244_11
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9571..10575)
DNA (1005bp) protein (335aa)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae (strain T3T1).;"
Ornithine carbamoyltransferase n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W2T1_HAEP3
ornithine carbamoyltransferase 1
L2_031_124G1_scaffold_244_12
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10805..12778
DNA (1974bp) protein (658aa)
3''''-nucleotidase n=1 Tax=Haemophilus sputorum RepID=UPI000248AF7B
2':3'-cyclic-nucleotide 2'-phosphodiesterase
2':3'-cyclic-nucleotide 2'-phosphodiesterase {ECO:0000313|EMBL:CBW14671.1}; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae (strain T3T1).;"
L2_031_124G1_scaffold_244_13
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12937..14451)
DNA (1515bp) protein (505aa)
Transporter n=1 Tax=Haemophilus parainfluenzae HK2019 RepID=I3BK68_HAEPA
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae HK2019.;"
hypothetical protein
L2_031_124G1_scaffold_244_14
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14489..15253
DNA (765bp) protein (255aa)
PF04391 family protein n=1 Tax=Haemophilus parainfluenzae HK2019 RepID=I3BJR8_HAEPA
PF04391 family protein {ECO:0000313|EMBL:EIJ31611.1}; TaxID=1095746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parainfluenzae HK2019.;"
hypothetical protein
Displaying 14 items

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