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L2_037_000G1_scaffold_1042

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000G1_scaffold_1042_1
unknown

Not on your lists

comp(3..209)
DNA (207bp) protein (69aa)

This feature has no annotations

L2_037_000G1_scaffold_1042_2
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(202..1338)
DNA (1137bp) protein (379aa)
flagellar biosynthesis protein FlhB n=1 Tax=Pseudomonas fragi RepID=UPI0002EAD863
Flagellar biosynthesis protein FlhB {ECO:0000313|EMBL:EMI07465.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
flagellar biosynthesis protein FlhB
L2_037_000G1_scaffold_1042_3
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1341..2123)
DNA (783bp) protein (261aa)
Flagellar biosynthetic protein fliR n=1 Tax=Pseudomonas sp. CF149 RepID=S6JBV1_9PSED
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
fliR; flagellar biosynthesis protein FliR
L2_037_000G1_scaffold_1042_4
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2124..2393)
DNA (270bp) protein (90aa)
Flagellar biosynthesis protein FliQ n=1 Tax=Pseudomonas sp. CF149 RepID=S6HQS6_9PSED
Flagellar biosynthesis protein FliQ {ECO:0000313|EMBL:EPJ91185.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
fliQ; flagellar biosynthetic protein FliQ
L2_037_000G1_scaffold_1042_5
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2418..3161)
DNA (744bp) protein (248aa)
flagellar biosynthesis protein FliP n=1 Tax=Pseudomonas psychrophila RepID=UPI000317A815
Flagellar biosynthesis protein FliP {ECO:0000313|EMBL:EMI07462.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
flagellar biosynthesis protein FliP
L2_037_000G1_scaffold_1042_6
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3161..3601)
DNA (441bp) protein (147aa)
Flagellar protein FliO n=1 Tax=Pseudomonas sp. CF149 RepID=S6HUC3_9PSED
Flagellar protein FliO {ECO:0000313|EMBL:EPJ91183.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
flagellar biosynthesis protein, FliO
L2_037_000G1_scaffold_1042_7
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3602..4069)
DNA (468bp) protein (156aa)
Flagellar motor switch protein FliN n=1 Tax=Pseudomonas chlororaphis subsp. aurantiaca PB-St2 RepID=V8DBT9_9PSED
fliN; flagellar motor switch protein
Flagellar motor switch protein FliN {ECO:0000313|EMBL:EJL08885.1}; TaxID=1038921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis subsp. aureofaciens 30-84.;"
L2_037_000G1_scaffold_1042_8
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4126..5094)
DNA (969bp) protein (323aa)
Flagellar motor switch protein FliM n=1 Tax=Pseudomonas sp. Lz4W RepID=M5R0I5_9PSED
Flagellar motor switch protein FliM {ECO:0000256|PIRNR:PIRNR002888}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
flagellar motor switch protein FliM
L2_037_000G1_scaffold_1042_9
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5104..5595)
DNA (492bp) protein (164aa)
Flagellar basal body-associated protein FliL n=1 Tax=Pseudomonas sp. Lz4W RepID=M5QIX7_9PSED
Flagellar basal body-associated protein FliL {ECO:0000313|EMBL:EMI07458.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
flagellar basal body-associated protein
L2_037_000G1_scaffold_1042_10
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5792..7141)
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Pseudomonas psychrophila RepID=UPI0002DEE09E
Flagellar hook-length control protein {ECO:0000313|EMBL:EMI07457.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
flagellar hook-length control protein
L2_037_000G1_scaffold_1042_11
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7219..7581)
DNA (363bp) protein (121aa)
Hpt protein n=1 Tax=Pseudomonas sp. CF149 RepID=S6HUC0_9PSED
Hpt protein {ECO:0000313|EMBL:EPJ91178.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
Hpt domain-containing protein
L2_037_000G1_scaffold_1042_12
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7613..9328)
DNA (1716bp) protein (572aa)
chemotaxis protein CheY n=1 Tax=Pseudomonas fragi RepID=UPI000288384E
Response regulator {ECO:0000313|EMBL:EMI07455.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
response regulator receiver domain-containing protein
L2_037_000G1_scaffold_1042_13
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9325..9630)
DNA (306bp) protein (102aa)
Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) n=1 Tax=Pseudomonas sp. GM17 RepID=J2NWG8_9PSED
anti-anti-sigma regulatory factor
Uncharacterized protein {ECO:0000313|EMBL:AJO77276.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MRSN12121.;"
L2_037_000G1_scaffold_1042_14
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9717..10169)
DNA (453bp) protein (151aa)
Flagellar biosynthesis chaperone n=1 Tax=Pseudomonas sp. Lz4W RepID=M5QIX3_9PSED
Flagellar biosynthesis chaperone {ECO:0000313|EMBL:EMI07453.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
flagellar biogenesis protein
L2_037_000G1_scaffold_1042_15
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10176..11534)
DNA (1359bp) protein (453aa)
Flagellum-specific ATP synthase n=1 Tax=Pseudomonas sp. CF149 RepID=S6HLI3_9PSED
Flagellum-specific ATP synthase {ECO:0000313|EMBL:EPJ91174.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
fliI; ATP synthase
L2_037_000G1_scaffold_1042_16
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11524..12297)
DNA (774bp) protein (258aa)
Flagellar assembly protein H n=1 Tax=Pseudomonas sp. CF149 RepID=S6HUB4_9PSED
Flagellar assembly protein H {ECO:0000313|EMBL:EPJ91173.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
flagellar assembly protein FliH
L2_037_000G1_scaffold_1042_17
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12298..13320)
DNA (1023bp) protein (341aa)
flagellar motor switch protein FliG n=1 Tax=Pseudomonas psychrophila RepID=UPI00030D72F5
Flagellar motor switch protein FliG {ECO:0000256|PIRNR:PIRNR003161}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
fliG; flagellar motor switch protein FliG
L2_037_000G1_scaffold_1042_18
Pseudomonas sp. GM48, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13313..15106)
DNA (1794bp) protein (598aa)
Flagellar M-ring protein n=1 Tax=Pseudomonas sp. GM48 RepID=J3A6A8_9PSED
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; Flags: Precursor;; TaxID=1144330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM48.;"
flagellar M-ring protein FliF
L2_037_000G1_scaffold_1042_19
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15121..15453)
DNA (333bp) protein (111aa)
flagellar hook-basal body protein FliE n=1 Tax=Pseudomonas fragi RepID=UPI00035D2541
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
flagellar hook-basal body protein FliE
L2_037_000G1_scaffold_1042_20
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15639..17048)
DNA (1410bp) protein (470aa)
Fis family transcriptional regulator n=1 Tax=Pseudomonas RepID=UPI000379983F
Fis family transcriptional regulator {ECO:0000313|EMBL:ERP40606.1}; TaxID=1221522 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens NCIMB 11764.;"
atoC; Fis family two component sigma-54 specific transcriptional regulator
L2_037_000G1_scaffold_1042_21
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17048..18298)
DNA (1251bp) protein (417aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
sensor histidine kinase n=1 Tax=Pseudomonas psychrophila RepID=UPI0003819DEB
histidine kinase
L2_037_000G1_scaffold_1042_22
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18408..19883)
DNA (1476bp) protein (492aa)
ATPase AAA n=1 Tax=Pseudomonas fragi RepID=UPI0002FC1E1B
Sigma-54 dependent transcription regulator {ECO:0000313|EMBL:EPJ91167.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
sigma-54 dependent transcription regulator
L2_037_000G1_scaffold_1042_23
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20061..20354)
DNA (294bp) protein (98aa)
flagellar assembly protein FliT n=1 Tax=Pseudomonas psychrophila RepID=UPI0002F692EA
Flagellar protein FliT {ECO:0000313|EMBL:EMI07444.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
flagellar assembly protein FliT
L2_037_000G1_scaffold_1042_24
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20380..20769)
DNA (390bp) protein (130aa)
flagellar biosynthesis protein FliS n=1 Tax=Pseudomonas fragi RepID=UPI0002DFF370
Flagellar protein FliS {ECO:0000313|EMBL:EPJ91165.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
Flagellar biosynthesis protein FliS
L2_037_000G1_scaffold_1042_25
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20869..22236)
DNA (1368bp) protein (456aa)
flagellar cap protein FliD n=1 Tax=Pseudomonas fragi RepID=UPI0002D8C9FD
Flagellar hook-associated protein 2 {ECO:0000313|EMBL:EMI07442.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
Flagellar hook-associated protein FliD
L2_037_000G1_scaffold_1042_26
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22317..22670)
DNA (354bp) protein (118aa)
Flagellin FlaG n=2 Tax=Pseudomonas putida RepID=U7RK69_PSEPU
flaG; putative flagellar biosynthesis protein
Putative flagellar biosynthesis protein {ECO:0000313|EMBL:BAN53237.1}; TaxID=1211579 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida NBRC 14164.;"
L2_037_000G1_scaffold_1042_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22742..24391)
DNA (1650bp) protein (550aa)
flagellin n=1 Tax=Pseudomonas fluorescens RepID=UPI0002E6A97F
FliC protein {ECO:0000313|EMBL:KIR21234.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
Flagellin protein FlaB
L2_037_000G1_scaffold_1042_28
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24625..25551)
DNA (927bp) protein (309aa)
3-oxoacyl-ACP synthase n=1 Tax=Pseudomonas sp. Lz4W RepID=M5R0G5_9PSED
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:EMI07439.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
3-oxoacyl-ACP synthase
L2_037_000G1_scaffold_1042_29
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25916..27493)
DNA (1578bp) protein (526aa)
Flagellar hook-associated protein FlgL n=1 Tax=Pseudomonas sp. Lz4W RepID=M5QIW0_9PSED
Flagellar hook-associated protein FlgL {ECO:0000313|EMBL:EMI07438.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
flgL; flagellar hook-associated protein FlgL
L2_037_000G1_scaffold_1042_30
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27508..29553)
DNA (2046bp) protein (682aa)
flagellar hook-associated protein FlgK n=1 Tax=Pseudomonas fragi RepID=UPI000288A516
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:EMI07437.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
flagellar hook-associated protein FlgK
Displaying items 1-30 of 118 in total

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