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L2_037_000G1_scaffold_1171

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000G1_scaffold_1171_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(103..1212)
DNA (1110bp) protein (370aa)
Leucine-specific-binding protein LivK n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BI87_9ENTR
leucine ABC transporter substrate-binding protein
Leucine ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHY10882.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_000G1_scaffold_1171_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1636..2019
DNA (384bp) protein (128aa)
Acetyltransferase, GNAT family n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BI89_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY10883.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_000G1_scaffold_1171_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2086..3183)
DNA (1098bp) protein (366aa)
Receptor family ligand-binding protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BI90_9ENTR
leucine ABC transporter substrate-binding protein
Leucine ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHY10884.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_000G1_scaffold_1171_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3515..4309)
DNA (795bp) protein (265aa)
RNA polymerase sigma factor RpoH n=11 Tax=Citrobacter RepID=C1MDD2_9ENTR
RNA polymerase factor sigma-32
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_000G1_scaffold_1171_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4443..5501)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BI93_9ENTR
ftsX; cell division protein FtsX
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_000G1_scaffold_1171_6
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5494..6162)
DNA (669bp) protein (223aa)
Cell division ATP-binding protein FtsE n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BI94_9ENTR
cell division protein FtsE
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EFE06138.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
L2_037_000G1_scaffold_1171_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6165..7691)
DNA (1527bp) protein (509aa)
cell division protein FtsY n=1 Tax=Citrobacter freundii RepID=UPI0002DD26B4
cell division protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_000G1_scaffold_1171_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7968..8564
DNA (597bp) protein (199aa)
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Ribosomal RNA small subunit methyltransferase D n=1 Tax=Citrobacter sp. KTE30 RepID=R8UK79_9ENTR
rsmD; 16S rRNA methyltransferase
L2_037_000G1_scaffold_1171_9
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8554..8829
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HFB2_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:GAL46249.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
hypothetical protein
L2_037_000G1_scaffold_1171_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8929..9288)
DNA (360bp) protein (120aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=J0M5V4_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY10891.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_000G1_scaffold_1171_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9430..10056
DNA (627bp) protein (209aa)
YhhN-like protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BIA2_9ENTR
membrane protein
Membrane protein {ECO:0000313|EMBL:AHY10892.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_000G1_scaffold_1171_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10132..12330
DNA (2199bp) protein (733aa)
zntA; zinc ABC transporter ATPase (EC:3.6.3.3 3.6.3.5)
Zinc ABC transporter ATPase {ECO:0000313|EMBL:AHY10893.1}; EC=3.6.3.3 {ECO:0000313|EMBL:AHY10893.1};; EC=3.6.3.5 {ECO:0000313|EMBL:AHY10893.1};; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Lead, cadmium, zinc and mercury-transporting ATPase n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SCC9_CITFR
L2_037_000G1_scaffold_1171_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12406..12651)
DNA (246bp) protein (82aa)
Sulfurtransferase TusA {ECO:0000256|HAMAP-Rule:MF_00413}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00413};; tRNA 2-thiouridine synthesizing protein A {ECO:0000256|HAMAP-Rule:MF_00413}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Sulfurtransferase TusA n=6 Tax=Citrobacter RepID=J1G3H3_9ENTR
sulfur transfer protein SirA
L2_037_000G1_scaffold_1171_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12820..13485
DNA (666bp) protein (222aa)
membrane protein n=1 Tax=Citrobacter freundii RepID=UPI0002E800BE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY10895.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_000G1_scaffold_1171_15
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13558..14115
DNA (558bp) protein (186aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=D4BIA6_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KKC65573.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hypothetical protein
L2_037_000G1_scaffold_1171_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14119..15336)
DNA (1218bp) protein (406aa)
UPF0226 membrane protein CSAG_03684 n=2 Tax=Citrobacter RepID=C1MDE6_9ENTR
MFS transporter
UPF0226 membrane protein CFNIH1_04990 {ECO:0000256|HAMAP-Rule:MF_01118}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_000G1_scaffold_1171_17
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15470..16519
DNA (1050bp) protein (350aa)
Uncharacterized protein n=5 Tax=Enterobacteriaceae RepID=D4BIA8_9ENTR
permease
Uncharacterized protein {ECO:0000313|EMBL:EFE06152.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
L2_037_000G1_scaffold_1171_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16582..17172
DNA (591bp) protein (197aa)
4'-phosphopantetheinyl transferase family protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BIA9_9ENTR
ACP synthase
ACP synthase {ECO:0000313|EMBL:AHY10899.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_000G1_scaffold_1171_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17164..17670)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1MDG7_9ENTR
phenolic acid decarboxylase
Phenolic acid decarboxylase {ECO:0000313|EMBL:AHY10900.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_000G1_scaffold_1171_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17770..18630
DNA (861bp) protein (287aa)
Transcriptional regulator, LysR family n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BIB1_9ENTR
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AHY10901.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_000G1_scaffold_1171_21
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18722..19123
DNA (402bp) protein (134aa)
Nickel-responsive regulator n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BIB2_9ENTR
nickel responsive regulator
Nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
L2_037_000G1_scaffold_1171_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19221..20345)
DNA (1125bp) protein (375aa)
Inner membrane transport permease yhhJ n=1 Tax=Shigella flexneri 1235-66 RepID=I6HF82_SHIFL
membrane protein
Membrane protein {ECO:0000313|EMBL:AHY10903.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_000G1_scaffold_1171_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20345..23092)
DNA (2748bp) protein (916aa)
ABC transporter, ATP-binding protein n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BIB4_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:AHY10904.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
hypothetical protein
L2_037_000G1_scaffold_1171_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23089..24156)
DNA (1068bp) protein (356aa)
HlyD family secretion protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8V5Z0_9ENTR
membrane protein
Membrane protein {ECO:0000313|EMBL:AHY10905.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_000G1_scaffold_1171_25
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24262..24378
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6HF79_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:CEJ64858.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
L2_037_000G1_scaffold_1171_26
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24509..25675)
DNA (1167bp) protein (389aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SC98_CITFR
Putative alcohol dehydrogenase {ECO:0000313|EMBL:GAL46230.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
alcohol dehydrogenase
L2_037_000G1_scaffold_1171_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25709..26023)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SC97_CITFR
antibiotic biosynthesis monooxygenase
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AHY10907.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_037_000G1_scaffold_1171_28
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26041..26616)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SC96_CITFR
Putative transcription antiterminator {ECO:0000313|EMBL:GAL46228.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
transcriptional regulator
L2_037_000G1_scaffold_1171_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26613..28172)
DNA (1560bp) protein (520aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SC95_CITFR
FAD-linked oxidase {ECO:0000313|EMBL:AHY10909.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
FAD-linked oxidase
L2_037_000G1_scaffold_1171_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28169..29848)
DNA (1680bp) protein (560aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SC94_CITFR
FAD-dependent oxidoreductase {ECO:0000313|EMBL:AHY10910.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
FAD-dependent oxidoreductase
Displaying items 1-30 of 98 in total

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