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L2_037_000G1_scaffold_1231

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000G1_scaffold_1231_1
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(427..3321)
DNA (2895bp) protein (965aa)
bgl5; beta-glucosidase (EC:3.2.1.52)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU85_9BIFI
Glycosyl hydrolase {ECO:0000313|EMBL:BAR04496.1}; Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EEG70226.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L2_037_000G1_scaffold_1231_2
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3753..5786
DNA (2034bp) protein (678aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PBC1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15851.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
protein kinase
L2_037_000G1_scaffold_1231_3
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5974..6957
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU88_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70229.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
DSBA oxidoreductase
L2_037_000G1_scaffold_1231_4
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7461..8951
DNA (1491bp) protein (497aa)
G5 domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU89_9BIFI
Lytic transglycosylase {ECO:0000313|EMBL:KEF29325.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
G5 domain protein
L2_037_000G1_scaffold_1231_5
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


9025..9954
DNA (930bp) protein (310aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Bifidobacterium RepID=C0BU90_9BIFI
16S rRNA methyltransferase
L2_037_000G1_scaffold_1231_6
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9951..10859
DNA (909bp) protein (303aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BU91_9BIFI
4-diphosphocytidyl-2C-methyl-D-erythritol kinase
L2_037_000G1_scaffold_1231_7
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10903..11526
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BU92_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70233.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_037_000G1_scaffold_1231_8
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11763..13226)
DNA (1464bp) protein (488aa)
tRNA adenylyltransferase n=2 Tax=Bifidobacterium RepID=C0BU94_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15857.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
RNA nucleotidyltransferase
L2_037_000G1_scaffold_1231_9
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13270..13920
DNA (651bp) protein (217aa)
Hydrolase, NUDIX family n=2 Tax=Bifidobacterium RepID=C0BU95_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15858.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
phosphohydrolase
L2_037_000G1_scaffold_1231_10
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13884..16046
DNA (2163bp) protein (721aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NXF5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15860.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L2_037_000G1_scaffold_1231_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16043..17758
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q1J8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR04507.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
membrane protein
L2_037_000G1_scaffold_1231_12
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17800..19824
DNA (2025bp) protein (675aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P568_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15864.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
virulence factor MviN family protein
L2_037_000G1_scaffold_1231_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20039..20296
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BUA0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70241.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
ATPase AAA
L2_037_000G1_scaffold_1231_14
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20570..21205)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUA1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70242.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
5'-nucleotidase
L2_037_000G1_scaffold_1231_15
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21569..21910
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUA4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70245.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_037_000G1_scaffold_1231_16
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22238..22906)
DNA (669bp) protein (223aa)
Predicted protein n=1 Tax=Streptomyces sp. AA4 RepID=D9V4P4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KFI52733.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
GntR family transcriptional regulator
L2_037_000G1_scaffold_1231_17
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22940..24124)
DNA (1185bp) protein (395aa)
Major facilitator superfamily MFS_1 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F094_CONWI
MFS transporter {ECO:0000313|EMBL:KFI52732.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
major facilitator superfamily protein
L2_037_000G1_scaffold_1231_18
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24252..27347)
DNA (3096bp) protein (1032aa)
Peptidase S15 {ECO:0000313|EMBL:KFI52731.1}; EC=3.1.1.84 {ECO:0000313|EMBL:KFI52731.1};; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
peptidase S15 n=1 Tax=Nocardiopsis baichengensis RepID=UPI00034CCED9
peptidase
L2_037_000G1_scaffold_1231_19
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27383..28186)
DNA (804bp) protein (268aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Rhodococcus equi NBRC 101255 = C 7 RepID=U5DPV8_COREQ
Spermidine/putrescine ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:KFI52729.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
ABC-type spermidine/putrescine transport system, permease component II
L2_037_000G1_scaffold_1231_20
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28183..29046)
DNA (864bp) protein (288aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodococcus equi NBRC 101255 = C 7 RepID=U5DSB1_COREQ
Spermidine/putrescine ABC superfamily ATP binding cassette transporter, permease protein {ECO:0000313|EMBL:KFI52728.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
binding-protein-dependent transporter inner membrane component
L2_037_000G1_scaffold_1231_21
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29063..30139)
DNA (1077bp) protein (359aa)
ABC transporter, solute-binding protein n=2 Tax=Corynebacterium equii RepID=E9SWW2_COREQ
Spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein {ECO:0000313|EMBL:KFI52727.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
Spermidine/putrescine-binding periplasmic protein
L2_037_000G1_scaffold_1231_22
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30309..31373
DNA (1065bp) protein (355aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
Putative phenylalanine aminotransferase n=7 Tax=Mycobacterium abscessus RepID=H0IJ70_MYCAB
aminotransferase
L2_037_000G1_scaffold_1231_23
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31370..32347
DNA (978bp) protein (326aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KFI52725.1}; EC=1.1.1.310 {ECO:0000313|EMBL:KFI52725.1};; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
D-isomer specific 2-hydroxyacid dehydrogenase n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1UXD7_9MICC
D-isomer specific 2-hydroxyacid dehydrogenase
L2_037_000G1_scaffold_1231_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32413..33453
DNA (1041bp) protein (347aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Thioredoxin reductase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUA5_9BIFI
thioredoxin reductase
L2_037_000G1_scaffold_1231_25
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33610..34965)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P581_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15874.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
chromosome partitioning protein ParB
L2_037_000G1_scaffold_1231_26
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34968..35948)
DNA (981bp) protein (327aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6PBF1_9BIFI
Chromosome partitioning protein ParA {ECO:0000313|EMBL:BAR04514.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
chromosome partitioning protein
L2_037_000G1_scaffold_1231_27
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36191..36994)
DNA (804bp) protein (268aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NUM3_9BIFI
16S rRNA methyltransferase
L2_037_000G1_scaffold_1231_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37161..37688)
DNA (528bp) protein (176aa)
R3H domain protein n=2 Tax=Bifidobacterium RepID=C0BUA9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEF29340.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
L2_037_000G1_scaffold_1231_29
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37831..38865)
DNA (1035bp) protein (345aa)
Membrane protein insertase, YidC/Oxa1 family n=2 Tax=Bifidobacterium RepID=C0BUB0_9BIFI
Membrane protein {ECO:0000313|EMBL:KEF29341.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
membrane protein
L2_037_000G1_scaffold_1231_30
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39913..41505
DNA (1593bp) protein (531aa)
Chromosomal replication initiator protein DnaA n=2 Tax=Bifidobacterium RepID=C0BUB4_9BIFI
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
chromosomal replication initiation protein
Displaying items 1-30 of 84 in total

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