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L2_037_000G1_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 395 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000G1_scaffold_0_1
unknown

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comp(3..128)
DNA (126bp) protein (42aa)

This feature has no annotations

L2_037_000G1_scaffold_0_2
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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comp(82..291)
DNA (210bp) protein (70aa)
Site-specific recombinases DNA invertase Pin homologs n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TGP3_9FIRM
Site-specific recombinases DNA invertase Pin homologs {ECO:0000313|EMBL:CDC72578.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L2_037_000G1_scaffold_0_3
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(298..561)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TXG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC72581.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
L2_037_000G1_scaffold_0_4
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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comp(564..1493)
DNA (930bp) protein (310aa)
ParB-like protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TGP7_9FIRM
ParB-like protein {ECO:0000313|EMBL:CDC72583.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
parB; Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J
L2_037_000G1_scaffold_0_5
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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comp(1450..1941)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TS14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC72584.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
L2_037_000G1_scaffold_0_6
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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comp(1922..2218)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TK13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC72585.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
L2_037_000G1_scaffold_0_7
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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comp(2221..2442)
DNA (222bp) protein (74aa)
Uncharacterized conserved protein UCP037246 n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TXG9_9FIRM
Uncharacterized conserved protein UCP037246 {ECO:0000313|EMBL:CDC72586.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L2_037_000G1_scaffold_0_8
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(3146..3298)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ISI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY43259.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_037_000G1_scaffold_0_9
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(3308..3586)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6UP80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC72587.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L2_037_000G1_scaffold_0_10
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3849..6488)
DNA (2640bp) protein (880aa)
Uncharacterized protein n=1 Tax=Dialister invisus CAG:218 RepID=R5T1M4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ52786.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
PHP/AAA ATPase domain-containing protein
L2_037_000G1_scaffold_0_11
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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comp(6501..9266)
DNA (2766bp) protein (922aa)
Exonuclease SbcCD C subunit n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DXZ6_9FIRM
Exonuclease SbcCD C subunit {ECO:0000313|EMBL:CDA89754.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
sbcC; exonuclease SbcC
L2_037_000G1_scaffold_0_12
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9263..10399)
DNA (1137bp) protein (379aa)
Exonuclease SbcCD D subunit n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DQ48_9FIRM
Exonuclease SbcD {ECO:0000313|EMBL:KJF39137.1}; Flags: Fragment;; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
exonuclease SbcD
L2_037_000G1_scaffold_0_13
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10410..13559)
DNA (3150bp) protein (1050aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65993.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
DNA or RNA helicases of superfamily II
L2_037_000G1_scaffold_0_14
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13635..13847)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JNK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY54309.1}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
Predicted transcriptional regulator
L2_037_000G1_scaffold_0_15
Shuttleworthia satelles, Shuttleworthia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14099..14995
DNA (897bp) protein (299aa)
Fic family protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G9Z1_9FIRM
Fic family protein {ECO:0000313|EMBL:EEP29438.1}; TaxID=626523 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Shuttleworthia.;" source="Shuttleworthia satelles DSM 14600.;"
hypothetical protein
L2_037_000G1_scaffold_0_16
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15528..17018)
DNA (1491bp) protein (497aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium sp. MSTE9 RepID=J1HA05_9CLOT
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EJF42143.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L2_037_000G1_scaffold_0_17
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

17151..18269
DNA (1119bp) protein (373aa)
Exonuclease SbcCD D subunit n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6XZF3_9FIRM
Exonuclease SbcCD D subunit {ECO:0000313|EMBL:CDD29128.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L2_037_000G1_scaffold_0_18
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18266..20989
DNA (2724bp) protein (908aa)
sbcC; DNA repair exonuclease, SbcC (EC:3.1.11.-)
Exonuclease SbcCD C subunit n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A3H4_9CLOT
Exonuclease SbcCD C subunit {ECO:0000313|EMBL:CCX37620.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L2_037_000G1_scaffold_0_19
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21143..23404
DNA (2262bp) protein (754aa)
Hydratase n=2 Tax=Megasphaera RepID=S7HMM0_9FIRM
Hydratase {ECO:0000313|EMBL:EPP18874.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
aconitase protein
L2_037_000G1_scaffold_0_20
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(23711..24736)
DNA (1026bp) protein (342aa)
Putative acetyl xylan esterase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YG57_9FIRM
Putative acetyl xylan esterase {ECO:0000313|EMBL:CDD30339.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
acetyl xylan esterase
L2_037_000G1_scaffold_0_21
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24861..26717)
DNA (1857bp) protein (619aa)
ABC transporter related n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AB30_9CLOT
ABC transporter related {ECO:0000313|EMBL:CCX39044.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
ABC transporter
L2_037_000G1_scaffold_0_22
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26714..28930)
DNA (2217bp) protein (739aa)
ABC transporter related n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KLB2_CLOPH
ABC transporter related
ABC transporter related {ECO:0000313|EMBL:ABX41241.1}; Flags: Precursor;; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L2_037_000G1_scaffold_0_23
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28927..29427)
DNA (501bp) protein (167aa)
Transcriptional regulator MarR family n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ADH8_9CLOT
Transcriptional regulator MarR family {ECO:0000313|EMBL:CCX39042.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
MarR family transcriptional regulator
L2_037_000G1_scaffold_0_24
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists


comp(29703..30071)
DNA (369bp) protein (123aa)
50S ribosomal protein L7/L12 n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YCM2_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
50S ribosomal protein L7/L12
L2_037_000G1_scaffold_0_25

Not on your lists


comp(30117..30629)
DNA (513bp) protein (171aa)
50S ribosomal protein L10 n=1 Tax=gut metagenome RepID=J9G2V7_9ZZZZ
50S ribosomal protein L10 {ECO:0000313|EMBL:EJX01179.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
LSU ribosomal protein L10P
L2_037_000G1_scaffold_0_26
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists


comp(30880..31572)
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YJR1_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
LSU ribosomal protein L1P
L2_037_000G1_scaffold_0_27
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(31641..32066)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Clostridium sp. CAG:352 RepID=R6RAL9_9CLOT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
LSU ribosomal protein L11P
L2_037_000G1_scaffold_0_28
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32186..32710)
DNA (525bp) protein (175aa)
Transcription termination/antitermination protein NusG n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ACL0_9CLOT
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
transcription antitermination protein nusG
L2_037_000G1_scaffold_0_29
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32757..32990)
DNA (234bp) protein (78aa)
Protein translocase subunit SecE n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A274_9CLOT
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
preprotein translocase, SecE subunit, bacterial
L2_037_000G1_scaffold_0_30
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists


comp(33007..33156)
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=2 Tax=Firmicutes RepID=R5A5Y7_9CLOT
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
rpmG; ribosomal protein L33
Displaying items 1-30 of 395 in total

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