ggKbase home page

L2_037_000G1_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 261 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000G1_scaffold_12_1
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

194..1117
DNA (924bp) protein (308aa)
Transcriptional regulator, LysR family (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5Y5_9CLOT
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEG53229.1}; Flags: Fragment;; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Transcriptional regulator
L2_037_000G1_scaffold_12_2
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1326..2513
DNA (1188bp) protein (396aa)
NADPH-dependent butanol dehydrogenase {ECO:0000313|EMBL:EEG53230.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EEG53230.1};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
NADPH-dependent butanol dehydrogenase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5Y6_9CLOT
iron-containing alcohol dehydrogenase
L2_037_000G1_scaffold_12_3
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2606..3226)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5Z4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG53239.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_037_000G1_scaffold_12_4
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3353..4642)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5Z6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG53240.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
GntR family transcriptional regulator
L2_037_000G1_scaffold_12_5
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4842..6281)
DNA (1440bp) protein (480aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5Z7_9CLOT
glutamyl-tRNA(Gln) amidotransferase subunit B
L2_037_000G1_scaffold_12_6
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6278..7837)
DNA (1560bp) protein (520aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5Z8_9CLOT
glutamyl-tRNA(Gln) amidotransferase subunit A
L2_037_000G1_scaffold_12_7
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7848..8141)
DNA (294bp) protein (98aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HGA9_9CLOT
glutamyl-tRNA(Gln) amidotransferase subunit C
L2_037_000G1_scaffold_12_8
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8204..9535)
DNA (1332bp) protein (444aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EEG53244.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EEG53244.1};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Aspartate--tRNA ligase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D600_9CLOT
aspartyl-tRNA synthetase
L2_037_000G1_scaffold_12_9
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10117..11775)
DNA (1659bp) protein (553aa)
gltB1; ferredoxin-dependent glutamate synthase GltB (EC:1.4.7.1)
Glutamate synthase domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D601_9CLOT
Glutamate synthase domain protein {ECO:0000313|EMBL:EEG53245.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L2_037_000G1_scaffold_12_10
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12038..13234)
DNA (1197bp) protein (399aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D604_9CLOT
L2_037_000G1_scaffold_12_11
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13620..14390)
DNA (771bp) protein (257aa)
Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D605_9CLOT
Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase {ECO:0000313|EMBL:EEG53249.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
glucosamine-6-phosphate deaminase
L2_037_000G1_scaffold_12_12
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14387..15676)
DNA (1290bp) protein (430aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HJ18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ75012.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L2_037_000G1_scaffold_12_13
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15673..16128)
DNA (456bp) protein (152aa)
Histidine triad domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D607_9CLOT
Histidine triad domain protein {ECO:0000313|EMBL:EEG53251.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
histidine triad (HIT) protein
L2_037_000G1_scaffold_12_14
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16252..17100)
DNA (849bp) protein (283aa)
ABC transporter, permease protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D608_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEG53252.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
binding-protein-dependent transport systems inner membrane component
L2_037_000G1_scaffold_12_15
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17093..17986)
DNA (894bp) protein (298aa)
ABC transporter, permease protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D609_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEG53253.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ABC transporter permease
L2_037_000G1_scaffold_12_16
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18045..19382)
DNA (1338bp) protein (446aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D610_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEG53254.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
sugar binding ABC transporter protein
L2_037_000G1_scaffold_12_17
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19612..20328
DNA (717bp) protein (239aa)
FCD domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D612_9CLOT
FCD domain protein {ECO:0000313|EMBL:EEG53256.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
GntR family transcriptional regulator
L2_037_000G1_scaffold_12_18
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20325..21125
DNA (801bp) protein (267aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D613_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEG53257.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
AraC family transcriptional regulator
L2_037_000G1_scaffold_12_19
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21223..22572
DNA (1350bp) protein (450aa)
MATE efflux family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D614_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EEG53258.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
MATE efflux family protein
L2_037_000G1_scaffold_12_20
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22851..23426
DNA (576bp) protein (192aa)
Putative DNA-directed RNA polymerase, omega subunit (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D615_9CLOT
Putative DNA-directed RNA polymerase, omega subunit {ECO:0000313|EMBL:EEG53225.1}; Flags: Fragment;; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_037_000G1_scaffold_12_21
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23643..24011)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D622_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG53222.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_037_000G1_scaffold_12_22
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24038..24823)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D623_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG53223.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_037_000G1_scaffold_12_23
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24962..26152)
DNA (1191bp) protein (397aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
deoB; phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D624_9CLOT
L2_037_000G1_scaffold_12_24
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26377..27870)
DNA (1494bp) protein (498aa)
Trap-t family transporter n=3 Tax=Clostridium symbiosum RepID=E7GT16_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ETP71680.1}; Flags: Precursor;; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
hypothetical protein
L2_037_000G1_scaffold_12_25
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(27952..28446)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RC31_SPISS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK79911.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
L2_037_000G1_scaffold_12_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28480..29538)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SLF7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92069.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_037_000G1_scaffold_12_27
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29592..29906)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNF3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP65340.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
protein of unassigned function
L2_037_000G1_scaffold_12_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29921..31279)
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037767FA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
L2_037_000G1_scaffold_12_29
Bacillus megaterium, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31477..32367
DNA (891bp) protein (297aa)
LysR family transcriptional regulator n=1 Tax=Bacillus megaterium WSH-002 RepID=G2RL22_BACME
Regulatory protein CysB
LysR family transcriptional regulator {ECO:0000313|EMBL:AEN88308.1}; TaxID=1006007 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus megaterium WSH-002.;"
L2_037_000G1_scaffold_12_30
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32455..33450)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D625_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG53200.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
Displaying items 1-30 of 261 in total

View Taxonomy