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L2_037_000G1_scaffold_190

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000G1_scaffold_190_1
Pseudomonas cichorii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..244
DNA (243bp) protein (81aa)
Major outer membrane lipoprotein n=167 Tax=Pseudomonas RepID=C3K649_PSEFS
lipoprotein
Outer membrane lipoprotein I {ECO:0000313|EMBL:AFO67279.1}; Flags: Fragment;; TaxID=36746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas cichorii.;"
L2_037_000G1_scaffold_190_2
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(378..1406)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Pseudomonas psychrophila RepID=UPI0002EB60EB
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EMI05237.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
ErfK/YbiS/YcfS/YnhG
L2_037_000G1_scaffold_190_3
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1516..1809)
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=M5QEV5_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EMI05236.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
hypothetical protein
L2_037_000G1_scaffold_190_4
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1868..2473)
DNA (606bp) protein (202aa)
arylesterase (EC:3.1.1.2)
esterase n=1 Tax=Pseudomonas psychrophila RepID=UPI00037A67DE
Acyl-CoA thioesterase I {ECO:0000313|EMBL:EMI05231.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
L2_037_000G1_scaffold_190_5
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2484..3167
DNA (684bp) protein (228aa)
ABC transporter ATP-binding protein n=1 Tax=Pseudomonas psychrophila RepID=UPI0002D75640
Putative ABC transportsystem, ATP-binding protein {ECO:0000313|EMBL:EPJ92657.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
efflux ABC transporter, ATP-binding protein
L2_037_000G1_scaffold_190_6
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3167..5671
DNA (2505bp) protein (835aa)
ABC transporter permease n=1 Tax=Pseudomonas psychrophila RepID=UPI0002E3DA40
Putative ABC transporter permease {ECO:0000313|EMBL:EMI05229.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
ABC transporter permease
L2_037_000G1_scaffold_190_7
Pseudomonas sp. GM78, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5706..6203
DNA (498bp) protein (166aa)
Transcription elongation factor GreB n=1 Tax=Pseudomonas sp. GM78 RepID=J3IQW5_9PSED
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1144337 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM78.;"
greB; transcription elongation factor GreB
L2_037_000G1_scaffold_190_8
unknown

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6331..6618
DNA (288bp) protein (96aa)

This feature has no annotations

L2_037_000G1_scaffold_190_9
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6667..6975)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Pseudomonas psychrophila RepID=UPI0002EBDBC1
Uncharacterized protein {ECO:0000313|EMBL:EMI05227.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
hypothetical protein
L2_037_000G1_scaffold_190_10
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7307..8983
DNA (1677bp) protein (559aa)
acid phosphatase n=1 Tax=Pseudomonas psychrophila RepID=UPI0002F2595D
Phosphoesterase family protein {ECO:0000313|EMBL:EPJ96219.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
plcB; phosphoesterase family protein PlcB
L2_037_000G1_scaffold_190_11
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9063..9497)
DNA (435bp) protein (145aa)
DoxX family protein n=1 Tax=Pseudomonas psychrophila RepID=UPI0002F47373
Uncharacterized protein {ECO:0000313|EMBL:EMI05226.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
Membrane protein, distant similarity to thiosulfate:quinone oxidoreductase DoxD
L2_037_000G1_scaffold_190_12
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9598..11016)
DNA (1419bp) protein (473aa)
glycosylase n=1 Tax=Pseudomonas psychrophila RepID=UPI000315541F
Putative transglycosylase {ECO:0000313|EMBL:EMI05225.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
glycosylase
L2_037_000G1_scaffold_190_13
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11254..12063
DNA (810bp) protein (270aa)
preprotein translocase subunit TatD n=1 Tax=Pseudomonas psychrophila RepID=UPI0002F66C8C
Sec-independent protein translocase TatD {ECO:0000313|EMBL:EMI05224.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
Deoxyribonuclease TatD
L2_037_000G1_scaffold_190_14
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12229..13710
DNA (1482bp) protein (494aa)
chemotaxis protein n=1 Tax=Pseudomonas psychrophila RepID=UPI0002D79333
Methyl-accepting chemotaxis transducer {ECO:0000313|EMBL:EPJ92644.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
putative methyl-accepting chemotaxis protein
L2_037_000G1_scaffold_190_15
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13811..14077
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Pseudomonas psychrophila RepID=UPI00030D90EA
Uncharacterized protein {ECO:0000313|EMBL:EMI05222.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
hypothetical protein
L2_037_000G1_scaffold_190_16
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14074..14871)
DNA (798bp) protein (266aa)
TesB-like acyl-CoA thioesterase 1 (EC:3.6.1.3)
acyl-CoA thioesterase n=1 Tax=Pseudomonas psychrophila RepID=UPI00031CC1E8
Uncharacterized protein {ECO:0000313|EMBL:EMI05221.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
L2_037_000G1_scaffold_190_17
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15058..15807)
DNA (750bp) protein (250aa)
metal-chelation protein CHAD n=1 Tax=Pseudomonas psychrophila RepID=UPI0002F398A4
Uncharacterized protein {ECO:0000313|EMBL:EMI05220.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
CHAD
L2_037_000G1_scaffold_190_18
Pseudomonas sp. GM25, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15836..16114)
DNA (279bp) protein (93aa)
Putative lipoprotein n=1 Tax=Pseudomonas fluorescens (strain Pf0-1) RepID=Q3K8Z1_PSEPF
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:EJM31993.1}; Flags: Precursor;; TaxID=1144327 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM25.;"
L2_037_000G1_scaffold_190_19
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16280..17338
DNA (1059bp) protein (353aa)
alpha/beta hydrolase n=1 Tax=Pseudomonas psychrophila RepID=UPI00030BB5F1
Phospholipase, patatin family protein {ECO:0000313|EMBL:EMI05218.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
UPF0028 protein YchK
L2_037_000G1_scaffold_190_20
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17346..18032)
DNA (687bp) protein (229aa)
Fis family transcriptional regulator n=1 Tax=Pseudomonas psychrophila RepID=UPI00030E6B32
KDP operon transcriptional regulatory protein KdpE {ECO:0000313|EMBL:EMI05217.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
two component transcriptional regulator
L2_037_000G1_scaffold_190_21
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18069..20735)
DNA (2667bp) protein (889aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
histidine kinase n=1 Tax=Pseudomonas psychrophila RepID=UPI0002FF6B5E
osmosensitive K+ channel Signal transduction histidine kinase
L2_037_000G1_scaffold_190_22
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20826..21374)
DNA (549bp) protein (183aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
Potassium-transporting ATPase C chain n=1 Tax=Pseudomonas sp. Lz4W RepID=M5QD92_9PSED
ATPase
L2_037_000G1_scaffold_190_23
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21396..23468)
DNA (2073bp) protein (691aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
kdpB; potassium-transporting ATPase subunit B (EC:3.6.3.12)
potassium-transporting ATPase subunit B n=1 Tax=Pseudomonas fragi RepID=UPI000289704A
L2_037_000G1_scaffold_190_24
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23479..25173)
DNA (1695bp) protein (565aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
kdpA1; potassium-transporting ATPase A chain KdpA (EC:3.6.3.12)
ATPase n=1 Tax=Pseudomonas psychrophila RepID=UPI0002F74E04
L2_037_000G1_scaffold_190_25
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25182..25271)
DNA (90bp) protein (30aa)
K+-transporting ATPase subunit F n=1 Tax=Pseudomonas sp. Lz4W RepID=M5QQR0_9PSED
K+-transporting ATPase subunit F {ECO:0000313|EMBL:EMI05212.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
K+-transporting ATPase subunit F
L2_037_000G1_scaffold_190_26
unknown

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comp(25393..25653)
DNA (261bp) protein (87aa)

This feature has no annotations

L2_037_000G1_scaffold_190_27
Pseudomonas coronafaciens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25813..26076)
DNA (264bp) protein (88aa)
YD repeat protein n=1 Tax=Pseudomonas fluorescens F113 RepID=G8Q525_PSEFL
Uncharacterized protein {ECO:0000313|EMBL:KGS16232.1}; Flags: Fragment;; TaxID=53409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas coronafaciens.;"
YD repeat protein
L2_037_000G1_scaffold_190_28
Pseudomonas coronafaciens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26242..27249)
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=F2ZS83_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EGI05286.1}; TaxID=563797 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas coronafaciens.;" source="Pseudomonas coronafaciens pv. oryzae str. 1_6.;"
hypothetical protein
L2_037_000G1_scaffold_190_29
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27368..28600)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Pseudomonas psychrophila RepID=UPI0002F06EDF
Uncharacterized protein {ECO:0000313|EMBL:EMI05211.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
hypothetical protein
L2_037_000G1_scaffold_190_30
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28628..29077)
DNA (450bp) protein (150aa)
UPF0260 protein CF149_16641 n=1 Tax=Pseudomonas sp. CF149 RepID=S6HUX1_9PSED
UPF0260 protein CF149_16641 {ECO:0000256|HAMAP-Rule:MF_00676}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
hypothetical protein
Displaying items 1-30 of 118 in total

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