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L2_037_000G1_scaffold_193

Search features with annotation key words

Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000G1_scaffold_193_1
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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181..318
DNA (138bp) protein (46aa)
Putative uncharacterized protein id=3760881 bin=GWF2_Clostridiales_36_10 species=Flavobacterium branchiophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Tax=GWF2_Clostridiales_36_10_curated
L2_037_000G1_scaffold_193_2
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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322..840
DNA (519bp) protein (173aa)
Acetyltransferase n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W8R7_DESOD
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AET67777.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
L2_037_000G1_scaffold_193_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1009..1950
DNA (942bp) protein (314aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rnz; ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q237_9CLOT
L2_037_000G1_scaffold_193_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2349..3284
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000367D35C
Uncharacterized protein {ECO:0000313|EMBL:EDT13762.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L2_037_000G1_scaffold_193_5
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3425..7768
DNA (4344bp) protein (1448aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
polC; DNA polymerase III, alpha subunit, Gram-positive type (EC:2.7.7.7)
DNA polymerase III polC-type n=1 Tax=Clostridium sp. CAG:221 RepID=R6G5A8_9CLOT
L2_037_000G1_scaffold_193_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8034..8840
DNA (807bp) protein (269aa)
Methyltransferase domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q2Y8_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:EKY22075.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L2_037_000G1_scaffold_193_7
unknown

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comp(8949..9098)
DNA (150bp) protein (50aa)

This feature has no annotations

L2_037_000G1_scaffold_193_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9211..9633)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q386_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY22077.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative zn-finger containing protein
L2_037_000G1_scaffold_193_9
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9827..10093)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002886E52
Uncharacterized protein {ECO:0000313|EMBL:EQK46957.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
hypothetical protein
L2_037_000G1_scaffold_193_10
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10147..10737)
DNA (591bp) protein (197aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q263_9CLOT
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
protein of unknown function DUF205
L2_037_000G1_scaffold_193_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11201..12244
DNA (1044bp) protein (348aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q2G2_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EKY22096.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
malK; Sugar ABC transporter, ATP-binding protein)
L2_037_000G1_scaffold_193_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12238..13104
DNA (867bp) protein (289aa)
ABC transporter, permease protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q3B0_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EKY22097.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
sugar ABC transporter permease
L2_037_000G1_scaffold_193_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13116..13943
DNA (828bp) protein (276aa)
ABC transporter, permease protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q295_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EKY22098.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
carbohydrate uptake ABC transporter permease
L2_037_000G1_scaffold_193_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14113..15444
DNA (1332bp) protein (444aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q267_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EKY22099.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
bacterial extracellular solute-binding family protein
L2_037_000G1_scaffold_193_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15544..16503
DNA (960bp) protein (320aa)
DHHA1 domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q312_9CLOT
DHHA1 domain protein {ECO:0000313|EMBL:EKY22100.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
oligoribonuclease
L2_037_000G1_scaffold_193_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16737..17903
DNA (1167bp) protein (389aa)
NADPH-dependent butanol dehydrogenase (EC:1.1.1.-)
NADPH-dependent butanol dehydrogenase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q2G5_9CLOT
NADPH-dependent butanol dehydrogenase {ECO:0000313|EMBL:EKY22101.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L2_037_000G1_scaffold_193_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18171..19013
DNA (843bp) protein (281aa)
gltD; ferredoxin-NADP(+) reductase subunit alpha (EC:1.4.1.13)
Oxidoreductase NAD-binding domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q3B5_9CLOT
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:EKY22102.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L2_037_000G1_scaffold_193_18
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19015..20412
DNA (1398bp) protein (466aa)
sudA; sulfide dehydrogenase subunit alpha (EC:1.8.-.- 1.18.1.2)
Glutamate synthase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q299_9CLOT
Glutamate synthase {ECO:0000313|EMBL:EKY22103.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L2_037_000G1_scaffold_193_19
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20531..21976
DNA (1446bp) protein (482aa)
Repressor LexA n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q271_9CLOT
Repressor LexA {ECO:0000313|EMBL:EKY22104.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative prophage repressor
L2_037_000G1_scaffold_193_20
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21993..23180
DNA (1188bp) protein (396aa)
Aminotransferase, class I/II n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q317_9CLOT
Aminotransferase, class I/II {ECO:0000313|EMBL:EKY22105.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
aspartate aminotransferase
L2_037_000G1_scaffold_193_21
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23462..23920
DNA (459bp) protein (153aa)
Ribosome maturation factor RimP n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q2H0_9CLOT
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rimP; ribosome maturation factor RimP
L2_037_000G1_scaffold_193_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23938..25011
DNA (1074bp) protein (358aa)
Transcription termination factor NusA n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q3C0_9CLOT
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
nusA; transcription termination/antitermination protein NusA
L2_037_000G1_scaffold_193_23
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25023..25289
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q2A4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY22108.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
L2_037_000G1_scaffold_193_24
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25282..25596
DNA (315bp) protein (105aa)
Ribosomal protein L7Ae n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q275_9CLOT
Ribosomal protein L7Ae {ECO:0000313|EMBL:EKY22109.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ribosomal L7Ae/L30e/S12e/Gadd45 family protein
L2_037_000G1_scaffold_193_25
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25612..27675
DNA (2064bp) protein (688aa)
Translation initiation factor IF-2 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q323_9CLOT
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
infB; translation initiation factor IF-2
L2_037_000G1_scaffold_193_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27688..28038
DNA (351bp) protein (117aa)
Ribosome-binding factor A n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q2H4_9CLOT
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rbfA; ribosome-binding factor A
L2_037_000G1_scaffold_193_27
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28040..29017
DNA (978bp) protein (326aa)
nrnA: bifunctional oligoribonuclease and PAP phosphatase NrnA (EC:3.1.-.- 3.1.3.7)
DHHA1 domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q3C5_9CLOT
DHHA1 domain protein {ECO:0000313|EMBL:EKY22112.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
L2_037_000G1_scaffold_193_28
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29021..29899
DNA (879bp) protein (293aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
truB; tRNA pseudouridine synthase B (EC:5.4.99.25)
tRNA pseudouridine synthase B n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q2A9_9CLOT
L2_037_000G1_scaffold_193_29
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29910..30848
DNA (939bp) protein (313aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
ribF; bifunctional riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Clostridium sp. CAG:265 RepID=R6KJG4_9CLOT
L2_037_000G1_scaffold_193_30
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


31014..31277
DNA (264bp) protein (88aa)
30S ribosomal protein S15 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q2H9_9CLOT
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rpsO; 30S ribosomal protein S15
Displaying items 1-30 of 121 in total

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