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L2_037_000G1_scaffold_219

Search features with annotation key words

Displaying items 1-30 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000G1_scaffold_219_1
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..210
DNA (210bp) protein (70aa)
Transcriptional regulatory protein, C-terminal domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWH9_9FIRM
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EDM99516.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
transcriptional regulatory protein
L2_037_000G1_scaffold_219_2
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

436..1041
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YKJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD29051.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
eqbH; ABC transporter permease
L2_037_000G1_scaffold_219_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1043..1714
DNA (672bp) protein (224aa)
Cobalt transport protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWI1_9FIRM
Cobalt transport protein {ECO:0000313|EMBL:EDM99518.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
cobalt transport protein
L2_037_000G1_scaffold_219_4
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

1728..3110
DNA (1383bp) protein (461aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YCT8_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD29064.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
ABC transporter
L2_037_000G1_scaffold_219_5
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

3124..4074
DNA (951bp) protein (317aa)
Transcriptional regulator AraC family n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YKK1_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDD29066.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
transcriptional regulator
L2_037_000G1_scaffold_219_6
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4199..5965
DNA (1767bp) protein (589aa)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWI4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM99521.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ABC-type multidrug transport system, ATPase and permease components
L2_037_000G1_scaffold_219_7
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5967..7715
DNA (1749bp) protein (583aa)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWI5_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM99522.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ABC-type multidrug transport system, ATPase and permease components
L2_037_000G1_scaffold_219_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7712..8098
DNA (387bp) protein (129aa)
Iron dependent repressor DNA binding domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWJ6_9FIRM
Iron dependent repressor DNA binding domain protein {ECO:0000313|EMBL:EDM99533.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Mn-dependent transcriptional regulator
L2_037_000G1_scaffold_219_9
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8161..8583
DNA (423bp) protein (141aa)
Transcriptional regulatory protein, C-terminal domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWH9_9FIRM
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EDM99516.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
two-component response regulator
L2_037_000G1_scaffold_219_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8729..9397
DNA (669bp) protein (223aa)
Putative transcriptional regulatory protein CseB n=2 Tax=Oscillibacter RepID=U2QX29_9FIRM
Putative transcriptional regulatory protein CseB {ECO:0000313|EMBL:ERK63282.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_037_000G1_scaffold_219_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9375..10853
DNA (1479bp) protein (493aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Oscillibacter RepID=U2QD40_9FIRM
histidine kinase
L2_037_000G1_scaffold_219_12
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11327..12109
DNA (783bp) protein (261aa)
Uncharacterized protein n=4 Tax=Enterococcus faecium RepID=L2J1R4_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EOM19244.1}; TaxID=1157487 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0192.;"
hypothetical protein
L2_037_000G1_scaffold_219_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12247..13107
DNA (861bp) protein (287aa)
yxlF2; ABC transporter ATP-binding protein YxlF (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=2 Tax=Oscillibacter RepID=U2QK60_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK63285.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L2_037_000G1_scaffold_219_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13104..15287
DNA (2184bp) protein (728aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R341_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK63286.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_037_000G1_scaffold_219_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15280..15996
DNA (717bp) protein (239aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QX33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK63287.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_037_000G1_scaffold_219_16
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16010..16441
DNA (432bp) protein (144aa)
Transcriptional regulatory protein, C-terminal domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWJ7_9FIRM
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EDM99534.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
two-component response regulator
L2_037_000G1_scaffold_219_17
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16489..16734)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99535.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_037_000G1_scaffold_219_18
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16740..17990)
DNA (1251bp) protein (417aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWJ9_9FIRM
L2_037_000G1_scaffold_219_19
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18148..18729
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99537.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_037_000G1_scaffold_219_20
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18840..19379)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99538.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_037_000G1_scaffold_219_21
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19376..19888)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99540.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_037_000G1_scaffold_219_22
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20171..20305
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A213_9FIRM
ABC transporter permease {ECO:0000313|EMBL:KJF39306.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L2_037_000G1_scaffold_219_23
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20548..20907)
DNA (360bp) protein (120aa)
DNA-binding helix-turn-helix protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWK6_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDM99543.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_037_000G1_scaffold_219_24
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21287..21703
DNA (417bp) protein (139aa)
DNA-directed RNA polymerase specialized sigma subunit (EC:2.7.7.6)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99545.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_037_000G1_scaffold_219_25
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21705..21953
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99546.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_037_000G1_scaffold_219_26
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22151..22987
DNA (837bp) protein (279aa)
Phage integrase SAM-like domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWL0_9FIRM
Phage integrase SAM-like domain protein {ECO:0000313|EMBL:EDM99547.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
phage integrase family protein
L2_037_000G1_scaffold_219_27
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23071..23463
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99548.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_037_000G1_scaffold_219_28
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23729..25045
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99549.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
protein of unknown function DUF4143
L2_037_000G1_scaffold_219_29
unknown

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25112..25333
DNA (222bp) protein (74aa)

This feature has no annotations

L2_037_000G1_scaffold_219_30
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25695..26120
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) RepID=B8FU35_DESHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL20449.1}; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain DCB-2 / DSM 10664).;"
Displaying items 1-30 of 132 in total

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