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L2_037_000G1_scaffold_240

Search features with annotation key words

Displaying items 1-30 of 267 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000G1_scaffold_240_1
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1628..2296)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NRH4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEF28024.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
phospholipase/Carboxylesterase
L2_037_000G1_scaffold_240_2
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2433..3647)
DNA (1215bp) protein (405aa)
Aminotransferase, class I/II n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSI6_9BIFI
Putative aminotransferase {ECO:0000313|EMBL:BAR04032.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
aspartate aminotransferase
L2_037_000G1_scaffold_240_3
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3860..4876)
DNA (1017bp) protein (339aa)
LysR substrate binding domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSI5_9BIFI
LysR substrate binding domain protein {ECO:0000313|EMBL:EEG71135.1}; Putative transcriptional regulator {ECO:0000313|EMBL:BAR04031.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_037_000G1_scaffold_240_4
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4890..5555)
DNA (666bp) protein (222aa)
Phospholipase, patatin family n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT75_9BIFI
Phospholipase, patatin family {ECO:0000313|EMBL:EEB22145.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
phospholipase
L2_037_000G1_scaffold_240_5
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5709..6647
DNA (939bp) protein (313aa)
Asparaginase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT76_9BIFI
Asparaginase {ECO:0000313|EMBL:EEB22146.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
asparaginase
L2_037_000G1_scaffold_240_6
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6777..8426)
DNA (1650bp) protein (550aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT77_9BIFI
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEF28029.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ABC transporter substrate-binding protein
L2_037_000G1_scaffold_240_7
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8663..9430)
DNA (768bp) protein (256aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Glutamate racemase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XT79_9BIFI
glutamate racemase
L2_037_000G1_scaffold_240_8
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9529..10428
DNA (900bp) protein (300aa)
Diaminopimelate epimerase {ECO:0000256|SAAS:SAAS00028055}; EC=5.1.1.7 {ECO:0000256|SAAS:SAAS00028063};; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Diaminopimelate epimerase n=2 Tax=Bifidobacterium RepID=C0BSH9_9BIFI
diaminopimelate epimerase
L2_037_000G1_scaffold_240_9
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10545..11210)
DNA (666bp) protein (222aa)
Vitamin K epoxide reductase family n=2 Tax=Bifidobacterium RepID=C0BSH8_9BIFI
Membrane protein {ECO:0000313|EMBL:KEF28032.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
membrane protein
L2_037_000G1_scaffold_240_10
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11303..12229
DNA (927bp) protein (309aa)
PHP domain protein n=2 Tax=Bifidobacterium RepID=C0BSH7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14768.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
histidinol phosphatase
L2_037_000G1_scaffold_240_11
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12358..12582)
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BSH6_9BIFI
ATP-binding protein
ATP-binding protein {ECO:0000313|EMBL:AIZ14961.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L2_037_000G1_scaffold_240_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12643..14154)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NU58_9BIFI
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:KEF28034.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
aminoglycoside phosphotransferase
L2_037_000G1_scaffold_240_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14317..15816
DNA (1500bp) protein (500aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
UvrD/REP helicase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSH4_9BIFI
DNA helicase II
L2_037_000G1_scaffold_240_14
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15842..17419)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6NRF8_9BIFI
Hydrolase {ECO:0000313|EMBL:KEF28036.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hydrolase
L2_037_000G1_scaffold_240_15
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17495..18379
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PYF9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR04018.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Lon protease
L2_037_000G1_scaffold_240_16
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18466..18891
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSH1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71121.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_037_000G1_scaffold_240_17
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19397..20962
DNA (1566bp) protein (522aa)
DivIVA domain repeat protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSG9_9BIFI
DivIVA domain repeat protein {ECO:0000313|EMBL:EEG71119.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04016.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
dihydrouridine synthase
L2_037_000G1_scaffold_240_18
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21054..22232
DNA (1179bp) protein (393aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=2 Tax=Bifidobacterium RepID=C0BSG8_9BIFI
1-deoxy-D-xylulose 5-phosphate reductoisomerase
L2_037_000G1_scaffold_240_19
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22320..23516
DNA (1197bp) protein (399aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=2 Tax=Bifidobacterium RepID=C0BSG7_9BIFI
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
L2_037_000G1_scaffold_240_20
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23610..25322
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSG6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71116.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
esterase
L2_037_000G1_scaffold_240_21
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25413..26141
DNA (729bp) protein (243aa)
DNA repair protein RecO n=2 Tax=Bifidobacterium RepID=C0BSG5_9BIFI
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
DNA recombination protein RecO
L2_037_000G1_scaffold_240_22
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26147..26938
DNA (792bp) protein (264aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
UDP pyrophosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=2 Tax=Bifidobacterium RepID=C0BSG4_9BIFI
L2_037_000G1_scaffold_240_23
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27000..28277)
DNA (1278bp) protein (426aa)
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSG3_9BIFI
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:EEG71113.1}; Putative nucleoside hydrolase {ECO:0000313|EMBL:BAR04010.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
nucleoside hydrolase
L2_037_000G1_scaffold_240_24
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28466..29566)
DNA (1101bp) protein (367aa)
NMT1/THI5-like protein n=2 Tax=Bifidobacterium RepID=C0BSG2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16009.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
ABC transporter substrate-binding protein
L2_037_000G1_scaffold_240_25
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29844..30695)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q248_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16007.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
ABC transporter permease
L2_037_000G1_scaffold_240_26
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31035..32591)
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NXY3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16005.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
beta-(1-2)-fructofuranosidase
L2_037_000G1_scaffold_240_27
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32738..34063)
DNA (1326bp) protein (442aa)
Sucrose transport protein n=2 Tax=Bifidobacterium RepID=R6NV58_9BIFI
Galactoside permease {ECO:0000313|EMBL:KEF28106.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
galactoside permease
L2_037_000G1_scaffold_240_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34351..35385)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q237_9BIFI
LacI family transcriptional regulator {ECO:0000313|EMBL:KEF28107.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
LacI family transcriptional regulator
L2_037_000G1_scaffold_240_29
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35495..35860)
DNA (366bp) protein (122aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=B6XUJ9_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEG71106.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L2_037_000G1_scaffold_240_30
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35928..36770)
DNA (843bp) protein (281aa)
Phosphomethylpyrimidine kinase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSF5_9BIFI
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:KEF28109.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
phosphomethylpyrimidine kinase
Displaying items 1-30 of 267 in total

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