ggKbase home page

L2_037_000G1_scaffold_293

Search features with annotation key words

Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000G1_scaffold_293_1
Prevotella veroralis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

123..1166
DNA (1044bp) protein (348aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Prevotella veroralis F0319 RepID=C9MRT8_9BACT
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EEX17796.1}; TaxID=649761 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella veroralis F0319.;"
hypothetical protein
L2_037_000G1_scaffold_293_2
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1211..2014)
DNA (804bp) protein (268aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CAQ5_9CLOT
Site-specific recombinase XerD {ECO:0000313|EMBL:CDB01372.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
Site-specific recombinase XerD
L2_037_000G1_scaffold_293_3
Actinobacillus pleuropneumoniae, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2058..2555)
DNA (498bp) protein (166aa)
Type I restriction enzyme EcoAI specificity protein n=1 Tax=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) RepID=B0BR05_ACTPJ
Type I restriction enzyme EcoAI specificity protein
Type I restriction enzyme EcoAI specificity protein {ECO:0000313|EMBL:ABY69990.1}; TaxID=434271 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Actinobacillus pleuropneumoniae serotype 3 (strain JL03).;"
L2_037_000G1_scaffold_293_4
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(2583..4193)
DNA (1611bp) protein (537aa)
Putative type I restriction-modification system S subunit n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7JEI1_9FUSO
Putative type I restriction-modification system S subunit {ECO:0000313|EMBL:CDE62028.1}; TaxID=1262899 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
putative type I restriction-modification system, S subunit
L2_037_000G1_scaffold_293_5
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4190..5680)
DNA (1491bp) protein (497aa)
Type I restriction-modification system methyltransferase subunit (EC:2.1.1.72)
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:CBK78467.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CBK78467.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Type I restriction-modification system methyltransferase subunit n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DL93_CLOSC
L2_037_000G1_scaffold_293_6
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5683..8058)
DNA (2376bp) protein (792aa)
Type I site-specific restriction-modification system, R (restriction) subunit and related helicases (EC:3.1.21.3)
Type I site-specific restriction-modification system, R (Restriction) subunit and related helicases {ECO:0000313|EMBL:CBK78468.1}; EC=3.1.21.3 {ECO:0000313|EMBL:CBK78468.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Type I site-specific restriction-modification system, R (Restriction) subunit and related helicases n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DL94_CLOSC
L2_037_000G1_scaffold_293_7
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8221..8724)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z2E4_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR72519.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L2_037_000G1_scaffold_293_8
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8721..8966)
DNA (246bp) protein (82aa)
DNA binding domain, excisionase family n=2 Tax=Oscillibacter RepID=U2R634_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:ERK68451.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_037_000G1_scaffold_293_9
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9106..10302)
DNA (1197bp) protein (399aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RS81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71884.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_037_000G1_scaffold_293_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10342..10716)
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=E9SR19_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06414.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L2_037_000G1_scaffold_293_11
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

comp(10730..11683)
DNA (954bp) protein (318aa)
UvrD/REP helicase n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5JCB6_9FIRM
UvrD/REP helicase {ECO:0000313|EMBL:CCY46621.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
hypothetical protein
L2_037_000G1_scaffold_293_12
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11708..12676)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IYP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS26906.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L2_037_000G1_scaffold_293_13
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(12682..13644)
DNA (963bp) protein (321aa)
Putative 3'-5' exonuclease n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ICG1_9FIRM
Putative 3'-5' exonuclease {ECO:0000313|EMBL:CCY39765.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
putative 3'-5' exonuclease
L2_037_000G1_scaffold_293_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13669..14805)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BW60_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF53251.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_037_000G1_scaffold_293_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15166..16308)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XCR8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY93653.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L2_037_000G1_scaffold_293_16

Not on your lists

comp(16305..16718)
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=human gut metagenome RepID=K1T700_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC62110.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_037_000G1_scaffold_293_17
unknown

Not on your lists

comp(16735..16962)
DNA (228bp) protein (76aa)

This feature has no annotations

L2_037_000G1_scaffold_293_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16975..17307)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56546.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_037_000G1_scaffold_293_19
unknown

Not on your lists

comp(17288..17425)
DNA (138bp) protein (46aa)

This feature has no annotations

L2_037_000G1_scaffold_293_20
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17446..18030)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M861_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66861.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L2_037_000G1_scaffold_293_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18136..18378
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IHC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59193.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Helix-turn-helix.
L2_037_000G1_scaffold_293_22
unknown

Not on your lists

comp(18542..18727)
DNA (186bp) protein (62aa)

This feature has no annotations

L2_037_000G1_scaffold_293_23
unknown

Not on your lists

comp(18738..19049)
DNA (312bp) protein (104aa)

This feature has no annotations

L2_037_000G1_scaffold_293_24
unknown

Not on your lists

comp(19052..20005)
DNA (954bp) protein (318aa)

This feature has no annotations

L2_037_000G1_scaffold_293_25
unknown

Not on your lists

comp(20020..20280)
DNA (261bp) protein (87aa)

This feature has no annotations

L2_037_000G1_scaffold_293_26
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(20273..20830)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ID73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40018.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L2_037_000G1_scaffold_293_27
unknown

Not on your lists

comp(20827..21027)
DNA (201bp) protein (67aa)

This feature has no annotations

L2_037_000G1_scaffold_293_28
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21040..21531)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W8Q3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39527.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Growth inhibitor
L2_037_000G1_scaffold_293_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21554..22186)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S081_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14216.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_037_000G1_scaffold_293_30
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22271..23287)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99564.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Displaying items 1-30 of 115 in total

View Taxonomy