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L2_037_000G1_scaffold_394

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Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000G1_scaffold_394_1
Pseudomonas savastanoi, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..99)
DNA (99bp) protein (33aa)
Glutamate synthase, small subunit {ECO:0000313|EMBL:AAZ35791.1}; EC=1.4.1.13 {ECO:0000313|EMBL:AAZ35791.1};; TaxID=264730 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6); (Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6)).;"
Glutamate synthase subunit beta n=1 Tax=Pseudomonas syringae pv. actinidiae ICMP 18807 RepID=S6VWY3_PSESF
glutamate synthase subunit beta
L2_037_000G1_scaffold_394_2
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(133..4581)
DNA (4449bp) protein (1483aa)
Glutamate synthase subunit alpha {ECO:0000313|EMBL:EPJ94084.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EPJ94084.1};; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
glutamate synthase subunit alpha n=1 Tax=Pseudomonas psychrophila RepID=UPI000374AFDF
gltB; glutamate synthase, large subunit
L2_037_000G1_scaffold_394_3
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5057..6634)
DNA (1578bp) protein (526aa)
cell division protein n=1 Tax=Pseudomonas psychrophila RepID=UPI0002DD32A6
Uncharacterized protein {ECO:0000313|EMBL:EMI08466.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
cell division protein
L2_037_000G1_scaffold_394_4
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6645..7745)
DNA (1101bp) protein (367aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
3-dehydroquinate synthase n=1 Tax=Pseudomonas psychrophila RepID=UPI0002E372BF
aroB; 3-dehydroquinate synthase
L2_037_000G1_scaffold_394_5
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7839..8330)
DNA (492bp) protein (164aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Pseudomonas sp. Lz4W RepID=M5R3C0_9PSED
L2_037_000G1_scaffold_394_6
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8362..9723)
DNA (1362bp) protein (454aa)
pilus modification protein PilQ n=1 Tax=Pseudomonas psychrophila RepID=UPI0002D3E9DA
Type IV pilus biogenesis protein PilQ {ECO:0000313|EMBL:EPJ94080.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
pilQ; type IV pilus biogenesis protein PilQ
L2_037_000G1_scaffold_394_7
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9736..10266)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Pseudomonas psychrophila RepID=UPI0002FED7B7
Pilus assembly protein, PilQ {ECO:0000313|EMBL:EPJ94079.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
pilP; type IV pilus biogenesis protein PilP
L2_037_000G1_scaffold_394_8
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10272..10883)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Pseudomonas psychrophila RepID=UPI0002D316FD
Type 4 fimbrial biogenesis protein PilO {ECO:0000313|EMBL:EPJ94078.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
pilO; type 4 fimbrial biogenesis protein PilO
L2_037_000G1_scaffold_394_9
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10883..11449)
DNA (567bp) protein (189aa)
pilus assembly protein PilN n=1 Tax=Pseudomonas psychrophila RepID=UPI0003185D5E
Type 4 fimbrial biogenesis protein PilN {ECO:0000313|EMBL:EMI08460.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
pilus assembly protein PilN
L2_037_000G1_scaffold_394_10
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11449..12420)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Pseudomonas psychrophila RepID=UPI0002F4FF04
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:EMI08459.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
pilus assembly protein PilM
L2_037_000G1_scaffold_394_11
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12625..15051
DNA (2427bp) protein (809aa)
peptidase n=1 Tax=Pseudomonas psychrophila RepID=UPI00035F7E79
Penicillin-binding protein 1A {ECO:0000313|EMBL:EMI08458.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
peptidase
L2_037_000G1_scaffold_394_12
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15125..16468)
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Pseudomonas psychrophila RepID=UPI00036F171B
Lipase, class 3 {ECO:0000313|EMBL:EPJ94074.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
lipase family protein
L2_037_000G1_scaffold_394_13
Pseudomonas batumici, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16646..17914)
DNA (1269bp) protein (423aa)
maeB; NADP-dependent malic enzyme (EC:1.1.1.40)
malate dehydrogenase n=1 Tax=Pseudomonas psychrophila RepID=UPI000316A41D
NADP-dependent malic enzyme {ECO:0000313|EMBL:KIH85722.1}; TaxID=226910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas batumici.;"
L2_037_000G1_scaffold_394_14
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18085..18921)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Pseudomonas psychrophila RepID=UPI0003040BBC
Nuclease (SNase-like) protein {ECO:0000313|EMBL:EPJ94071.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
nuclease
L2_037_000G1_scaffold_394_15
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18927..19151)
DNA (225bp) protein (75aa)
50S ribosomal protein L31 n=1 Tax=Pseudomonas psychrophila RepID=UPI0002E3065A
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
rpmE; 50S ribosomal protein L31
L2_037_000G1_scaffold_394_16
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19376..21595
DNA (2220bp) protein (740aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
primosome assembly protein PriA n=1 Tax=Pseudomonas psychrophila RepID=UPI000310B5F1
primosomal protein
L2_037_000G1_scaffold_394_17
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21766..23502
DNA (1737bp) protein (579aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
arginyl-tRNA synthetase n=1 Tax=Pseudomonas psychrophila RepID=UPI0002D751CE
L2_037_000G1_scaffold_394_18
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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23504..24199
DNA (696bp) protein (232aa)
cell division protein n=1 Tax=Pseudomonas psychrophila RepID=UPI000301F386
Protein FtsN {ECO:0000313|EMBL:EMI08452.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
ftsN; protein FtsN
L2_037_000G1_scaffold_394_19
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24406..24936
DNA (531bp) protein (177aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
ATP-dependent protease subunit HslV n=2 Tax=Pseudomonas RepID=M5QNZ8_9PSED
ATP-dependent protease subunit HslV
L2_037_000G1_scaffold_394_20
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25005..26339
DNA (1335bp) protein (445aa)
ATP-dependent protease n=1 Tax=Pseudomonas psychrophila RepID=UPI0002FA5405
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
hslU; ATP-dependent protease ATP-binding subunit HslU
L2_037_000G1_scaffold_394_21
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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26415..26786
DNA (372bp) protein (124aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Pseudomonas psychrophila RepID=UPI0003706600
Uncharacterized protein {ECO:0000313|EMBL:EPJ94064.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
hypothetical protein
L2_037_000G1_scaffold_394_22
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26886..27653)
DNA (768bp) protein (256aa)
poly(hydroxyalkanoate) granule-associated protein n=1 Tax=Pseudomonas psychrophila RepID=UPI00036E1072
Polyhydroxyalkanoate granule-associated protein GA2 {ECO:0000313|EMBL:EPJ94063.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
phaF; protein PhaF
L2_037_000G1_scaffold_394_23
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27784..28059)
DNA (276bp) protein (92aa)
Polyhydroxyalkanoic acid system protein n=1 Tax=Pseudomonas sp. Lz4W RepID=M5QZM2_9PSED
Polyhydroxyalkanoic acid system protein {ECO:0000313|EMBL:EMI08447.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
polyhydroxyalkanoic acid system protein
L2_037_000G1_scaffold_394_24
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28170..28940
DNA (771bp) protein (257aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000256|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
ubiE; ubiquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-)
ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Pseudomonas psychrophila RepID=UPI0002F71EC1
L2_037_000G1_scaffold_394_25
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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28940..29563
DNA (624bp) protein (208aa)
sterol-binding protein n=1 Tax=Pseudomonas psychrophila RepID=UPI000309EDD0
Sterol-binding domain-containing protein {ECO:0000313|EMBL:EMI08445.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
SCP-2 sterol transfer family protein
L2_037_000G1_scaffold_394_26
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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29560..31167
DNA (1608bp) protein (536aa)
Probable protein kinase UbiB {ECO:0000256|HAMAP-Rule:MF_00414, ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|HAMAP-Rule:MF_00414, ECO:0000256|SAAS:SAAS00063486};; Ubiquinone biosynthesis protein UbiB {ECO:0000256|HAMAP-Rule:MF_00414}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
ubiquinone biosynthesis protein UbiB n=1 Tax=Pseudomonas psychrophila RepID=UPI0002D5A765
putative ubiquinone biosynthesis-like protein
L2_037_000G1_scaffold_394_27
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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31230..31631
DNA (402bp) protein (134aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
hisI; phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
phosphoribosyl-AMP cyclohydrolase n=1 Tax=Pseudomonas psychrophila RepID=UPI00030D2893
L2_037_000G1_scaffold_394_28
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31624..31956
DNA (333bp) protein (111aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
hisE; phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31)
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Pseudomonas sp. CF149 RepID=S6I2I4_9PSED
L2_037_000G1_scaffold_394_29
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31980..32258
DNA (279bp) protein (93aa)
preprotein translocase subunit TatA n=1 Tax=Pseudomonas psychrophila RepID=UPI0002FC34F7
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
tatA; twin-arginine translocation protein TatA
L2_037_000G1_scaffold_394_30
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32269..32700
DNA (432bp) protein (144aa)
preprotein translocase subunit TatB n=1 Tax=Pseudomonas psychrophila RepID=UPI000316AEDD
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
tatB; preprotein translocase subunit TatB
Displaying items 1-30 of 74 in total

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