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L2_037_000G1_scaffold_536

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Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000G1_scaffold_536_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117..305)
DNA (189bp) protein (63aa)
Carbon storage regulator homolog n=11 Tax=Pseudomonas RepID=C3JXX9_PSEFS
rsmA; translational regulator RsmA
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
L2_037_000G1_scaffold_536_2
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(492..1727)
DNA (1236bp) protein (412aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Pseudomonas sp. CF149 RepID=S6HYP2_9PSED
L2_037_000G1_scaffold_536_3
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1811..4429)
DNA (2619bp) protein (873aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
alanyl-tRNA synthetase n=1 Tax=Pseudomonas fragi RepID=UPI00030AB87B
alanyl-tRNA synthetase
L2_037_000G1_scaffold_536_4
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4576..5580)
DNA (1005bp) protein (335aa)
threonine aldolase n=1 Tax=Pseudomonas fragi RepID=UPI0002FCCBE4
L-threonine aldolase {ECO:0000313|EMBL:EPJ95433.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
threonine aldolase
L2_037_000G1_scaffold_536_5
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6095..6607
DNA (513bp) protein (171aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|SAAS:SAAS00106234}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|SAAS:SAAS00106234};; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
riboflavin synthase subunit beta (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Pseudomonas sp. CF149 RepID=S6JCL9_9PSED
L2_037_000G1_scaffold_536_6
Pseudomonas batumici, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6938..8239
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Pseudomonas fragi RepID=UPI00038186BB
Hemolysin-type calcium-binding region {ECO:0000313|EMBL:KIH82218.1}; TaxID=226910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas batumici.;"
hypothetical protein
L2_037_000G1_scaffold_536_7
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8224..9246)
DNA (1023bp) protein (341aa)
Succinylglutamate desuccinylase {ECO:0000256|HAMAP-Rule:MF_00767, ECO:0000256|SAAS:SAAS00036677}; EC=3.5.1.96 {ECO:0000256|HAMAP-Rule:MF_00767, ECO:0000256|SAAS:SAAS00036667};; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
astE; succinylglutamate desuccinylase (EC:3.5.1.96)
succinylglutamate desuccinylase n=1 Tax=Pseudomonas fragi RepID=UPI0002E5325D
L2_037_000G1_scaffold_536_8
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9260..9547)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. Lz4W RepID=M5QY05_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EMI07847.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
hypothetical protein
L2_037_000G1_scaffold_536_9
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9612..10958)
DNA (1347bp) protein (449aa)
N-succinylarginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_01172, ECO:0000256|SAAS:SAAS00074425}; EC=3.5.3.23 {ECO:0000256|HAMAP-Rule:MF_01172, ECO:0000256|SAAS:SAAS00074418};; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
succinylarginine dihydrolase n=1 Tax=Pseudomonas fragi RepID=UPI00031AC124
succinylarginine dihydrolase
L2_037_000G1_scaffold_536_10
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10994..12463)
DNA (1470bp) protein (490aa)
N-succinylglutamate 5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01174}; EC=1.2.1.71 {ECO:0000256|HAMAP-Rule:MF_01174};; Succinylglutamic semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01174}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
succinylglutamate-semialdehyde dehydrogenase n=1 Tax=Pseudomonas fragi RepID=UPI0002ECEBF0
astD; succinylglutamate-semialdehyde dehydrogenase
L2_037_000G1_scaffold_536_11
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12463..13500)
DNA (1038bp) protein (346aa)
Arginine N-succinyltransferase {ECO:0000256|SAAS:SAAS00075375}; EC=2.3.1.109 {ECO:0000256|SAAS:SAAS00075375};; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
aruG3; arginine N-succinyltransferase subunit beta (EC:2.3.1.109)
arginine succinyltransferase n=1 Tax=Pseudomonas fragi RepID=UPI0003115B83
L2_037_000G1_scaffold_536_12
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13556..14575)
DNA (1020bp) protein (340aa)
Arginine N-succinyltransferase {ECO:0000256|SAAS:SAAS00075375}; EC=2.3.1.109 {ECO:0000256|SAAS:SAAS00075375};; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
Arginine N-succinyltransferase, alpha chain n=1 Tax=Pseudomonas sp. CF149 RepID=S6I6A6_9PSED
arginine N-succinyltransferase subunit alpha
L2_037_000G1_scaffold_536_13
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14662..15882)
DNA (1221bp) protein (407aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase (EC:2.6.1.11 2.6.1.17)
succinyldiaminopimelate aminotransferase n=1 Tax=Pseudomonas fragi RepID=UPI00028891CF
L2_037_000G1_scaffold_536_14
Pseudomonas sp. GM102, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16279..20409
DNA (4131bp) protein (1377aa)
hypothetical protein n=1 Tax=Pseudomonas sp. PAMC 26793 RepID=UPI0003072924
Uncharacterized protein {ECO:0000313|EMBL:EJL96571.1}; Flags: Precursor;; TaxID=1144321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM102.;"
hypothetical protein
L2_037_000G1_scaffold_536_15
Pseudomonas sp. CMAA1215, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20413..21393)
DNA (981bp) protein (327aa)
AraC family transcriptional regulator n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U6ZZB0_9PSED
AraC family transcriptional regulator {ECO:0000313|EMBL:ERO64437.1}; TaxID=1387231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CMAA1215.;"
glxA1; HTH-type transcriptional regulator GlxA
L2_037_000G1_scaffold_536_16
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21519..22283)
DNA (765bp) protein (255aa)
ABC transporter-like protein n=1 Tax=Pseudomonas sp. CF149 RepID=S6JCM9_9PSED
ABC transporter-like protein {ECO:0000313|EMBL:EPJ95444.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
ABC transporter-like
L2_037_000G1_scaffold_536_17
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22307..23419)
DNA (1113bp) protein (371aa)
Deacylase n=1 Tax=Pseudomonas sp. Lz4W RepID=M5R1M2_9PSED
Deacylase {ECO:0000313|EMBL:EMI07839.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
succinylglutamate desuccinylase/aspartoacylase
L2_037_000G1_scaffold_536_18
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23423..24121)
DNA (699bp) protein (233aa)
Amino acid ABC transporter permease n=1 Tax=Pseudomonas sp. Lz4W RepID=M5QK22_9PSED
Amino acid ABC transporter permease {ECO:0000313|EMBL:EMI07838.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
aotM-1; arginine/ornithine transport membrane protein AotM
L2_037_000G1_scaffold_536_19
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24118..24807)
DNA (690bp) protein (230aa)
L-arginine ABC transporter membrane protein / L-ornithine ABC transporter membrane protein n=4 Tax=Pseudomonas RepID=Q3K876_PSEPF
amino acid ABC transporter permease
L-arginine ABC transporter membrane protein / L-ornithine ABC transporter membrane protein {ECO:0000313|EMBL:ABA76028.1}; TaxID=205922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf0-1).;"
L2_037_000G1_scaffold_536_20
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24898..25680)
DNA (783bp) protein (261aa)
ABC transporter substrate-binding protein n=1 Tax=Pseudomonas tolaasii RepID=UPI0002DF1447
Pseudomonas putida strain UASWS0946 Contig137, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53767.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;"
ABC transporter substrate-binding protein
L2_037_000G1_scaffold_536_21
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26234..28189)
DNA (1956bp) protein (652aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
acetyl-CoA synthetase (EC:6.2.1.1)
acetyl-CoA synthetase n=1 Tax=Pseudomonas psychrophila RepID=UPI00031CD51D
L2_037_000G1_scaffold_536_22
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28608..28871
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF149 RepID=S6I6B8_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EPJ95450.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
hypothetical protein
L2_037_000G1_scaffold_536_23
Pseudomonas sp. CF161, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28987..29283
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF161 RepID=S6J492_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EPL09115.1}; TaxID=911241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF161.;"
hypothetical protein
L2_037_000G1_scaffold_536_24
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29787..31037
DNA (1251bp) protein (417aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Pseudomonas psychrophila RepID=UPI0002D393E2
ribonucleotide-diphosphate reductase subunit beta
L2_037_000G1_scaffold_536_25
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31289..31606
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. Lz4W RepID=M5QM91_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EMI07831.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
hypothetical protein
L2_037_000G1_scaffold_536_26
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32022..33083
DNA (1062bp) protein (354aa)
Diguanylate cyclase n=1 Tax=Pseudomonas sp. Lz4W RepID=M5R1L4_9PSED
Diguanylate cyclase {ECO:0000313|EMBL:EMI07829.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
histidine kinase
L2_037_000G1_scaffold_536_27
Pseudomonas deceptionensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33080..33406)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Pseudomonas fragi RepID=UPI0002EE782B
Uncharacterized protein {ECO:0000313|EMBL:AJE75773.1}; TaxID=882211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas deceptionensis.;"
hypothetical protein
L2_037_000G1_scaffold_536_28
Pseudomonas sp. CF149, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33640..34767
DNA (1128bp) protein (376aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Pseudomonas sp. CF149 RepID=S6JBN5_9PSED
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EPJ91120.1}; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
glycerophosphodiester phosphodiesterase
L2_037_000G1_scaffold_536_29
Pseudomonas sp. Lz4W, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34824..35177
DNA (354bp) protein (118aa)
Peptidase propeptide and YPEB domain-containing protein n=1 Tax=Pseudomonas sp. Lz4W RepID=M5QKL7_9PSED
Peptidase propeptide and YPEB domain-containing protein {ECO:0000313|EMBL:EMI07825.1}; TaxID=1206777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Lz4W.;"
peptidase propeptide and YPEB domain-containing protein
L2_037_000G1_scaffold_536_30
Pseudomonas deceptionensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35334..36521
DNA (1188bp) protein (396aa)
sensor histidine kinase n=1 Tax=Pseudomonas fragi RepID=UPI000302FFFE
Histidine kinase {ECO:0000313|EMBL:AJE75770.1}; TaxID=882211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas deceptionensis.;"
putative two-component regulatory system, sensor kinase protein
Displaying items 1-30 of 89 in total

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