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L2_037_000G1_scaffold_601

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000G1_scaffold_601_1
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

315..530
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B2T6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA55329.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_037_000G1_scaffold_601_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(550..1905)
DNA (1356bp) protein (452aa)
Citrate synthase (EC:2.3.3.5 2.3.3.1)
Citrate synthase n=3 Tax=Roseburia intestinalis RepID=D4KRR3_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000313|EMBL:CBL11788.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_037_000G1_scaffold_601_3
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1902..2345)
DNA (444bp) protein (148aa)
Transcriptional regulator MarR family n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B8E1_9FIRM
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDA55331.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Transcriptional regulators
L2_037_000G1_scaffold_601_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2559..3215)
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KWP5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL11785.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_037_000G1_scaffold_601_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3215..5335)
DNA (2121bp) protein (707aa)
ABC-type transport system involved in multi-copper enzyme maturation, permease component n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KWP4_9FIRM
ABC-type transport system involved in multi-copper enzyme maturation, permease component
ABC-type transport system involved in multi-copper enzyme maturation, permease component {ECO:0000313|EMBL:CBL11784.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_037_000G1_scaffold_601_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5335..6282)
DNA (948bp) protein (316aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G7Z3_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEV02099.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
multidrug ABC transporter ATPase
L2_037_000G1_scaffold_601_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6591..7193)
DNA (603bp) protein (201aa)
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED n=2 Tax=Roseburia RepID=D4KWP3_9FIRM
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CDA55337.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_037_000G1_scaffold_601_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7212..8492)
DNA (1281bp) protein (427aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ATT4_9FIRM
L2_037_000G1_scaffold_601_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8611..9492)
DNA (882bp) protein (294aa)
Transcriptional regulator n=3 Tax=Roseburia RepID=D4KRS0_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL11781.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_037_000G1_scaffold_601_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9654..11003
DNA (1350bp) protein (450aa)
MATE efflux family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G7Z8_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEV02104.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
putative efflux protein, MATE family
L2_037_000G1_scaffold_601_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11145..12020)
DNA (876bp) protein (292aa)
EDD domain protein, DegV family n=3 Tax=Roseburia RepID=D4KRS2_9FIRM
EDD domain protein, DegV family
EDD domain protein, DegV family {ECO:0000313|EMBL:CBL11779.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_037_000G1_scaffold_601_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12036..12506)
DNA (471bp) protein (157aa)
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Methylglyoxal synthase n=4 Tax=Roseburia RepID=D4KWN8_9FIRM
L2_037_000G1_scaffold_601_13
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12684..13193)
DNA (510bp) protein (170aa)
ADP-ribose pyrophosphatase n=4 Tax=Roseburia RepID=D4KRS4_9FIRM
ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CDA55344.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_037_000G1_scaffold_601_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13236..14945)
DNA (1710bp) protein (570aa)
Methyl-accepting chemotaxis protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KRS5_9FIRM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CBL09577.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Methyl-accepting chemotaxis protein
L2_037_000G1_scaffold_601_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14958..15839)
DNA (882bp) protein (294aa)
Basic membrane protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G803_9FIRM
Basic membrane protein {ECO:0000313|EMBL:EEV02109.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
nucleoside-binding protein
L2_037_000G1_scaffold_601_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15855..16169)
DNA (315bp) protein (105aa)
Nucleoside-binding protein n=3 Tax=Roseburia intestinalis RepID=D4KWN5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09578.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_037_000G1_scaffold_601_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16281..17858)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AWF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA55350.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L2_037_000G1_scaffold_601_18
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17885..18103)
DNA (219bp) protein (73aa)
Transcriptional regulator XRE family n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B8F9_9FIRM
Transcriptional regulator XRE family {ECO:0000313|EMBL:CDA55351.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Predicted transcriptional regulator
L2_037_000G1_scaffold_601_19
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18114..18593)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BQ01_9FIRM
Protein of unknown function (DUF3036).
Uncharacterized protein {ECO:0000313|EMBL:CDA55352.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_037_000G1_scaffold_601_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18891..19781)
DNA (891bp) protein (297aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7G809_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV02115.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_037_000G1_scaffold_601_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20122..20790)
DNA (669bp) protein (223aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6AZG0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA56330.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_037_000G1_scaffold_601_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20790..21569)
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6AWN5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA56328.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_037_000G1_scaffold_601_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21815..22183
DNA (369bp) protein (123aa)
Predicted transcriptional regulators n=3 Tax=Roseburia RepID=D4KWM8_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBL09587.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_037_000G1_scaffold_601_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22183..22881
DNA (699bp) protein (233aa)
ABC-type multidrug transport system, ATPase component n=3 Tax=Roseburia RepID=D4KWM7_9FIRM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CBL09588.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_037_000G1_scaffold_601_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22875..23708
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KRT7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL09589.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_037_000G1_scaffold_601_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23819..26401)
DNA (2583bp) protein (861aa)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=2 Tax=Roseburia intestinalis RepID=D4KWM5_9FIRM
ATPase, P-type (Transporting), HAD superfamily, subfamily IC {ECO:0000313|EMBL:CBL11765.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC
L2_037_000G1_scaffold_601_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26629..28014)
DNA (1386bp) protein (462aa)
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.4.1.14 1.97.-.- 1.4.1.13)
Sulfide dehydrogenase (Flavoprotein) subunit SudA {ECO:0000313|EMBL:CBL09591.1}; EC=1.4.1.13 {ECO:0000313|EMBL:CBL09591.1};; EC=1.4.1.14 {ECO:0000313|EMBL:CBL09591.1};; EC=1.97.-.- {ECO:0000313|EMBL:CBL09591.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Sulfide dehydrogenase (Flavoprotein) subunit SudA n=2 Tax=Roseburia RepID=D4KRT9_9FIRM
L2_037_000G1_scaffold_601_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28045..28923)
DNA (879bp) protein (293aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.97.-.- 1.18.1.2)
Sulfide dehydrogenase (Flavoprotein) subunit SudB {ECO:0000313|EMBL:CBL09592.1}; EC=1.18.1.2 {ECO:0000313|EMBL:CBL09592.1};; EC=1.97.-.- {ECO:0000313|EMBL:CBL09592.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Sulfide dehydrogenase (Flavoprotein) subunit SudB n=3 Tax=Roseburia intestinalis RepID=D4KRU0_9FIRM
L2_037_000G1_scaffold_601_29
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29145..29954)
DNA (810bp) protein (270aa)
ABC-type uncharacterized transport system, ATPase component n=3 Tax=Roseburia RepID=D4KRU1_9FIRM
ABC-type uncharacterized transport system, ATPase component
ABC-type uncharacterized transport system ATPase component {ECO:0000313|EMBL:CDA56315.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L2_037_000G1_scaffold_601_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29954..30916)
DNA (963bp) protein (321aa)
ABC-type uncharacterized transport system, permease component n=3 Tax=Roseburia intestinalis RepID=D4KRU2_9FIRM
ABC-type uncharacterized transport system, permease component
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEV02041.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Displaying items 1-30 of 105 in total

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