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L2_037_000G1_scaffold_730

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000G1_scaffold_730_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(346..1038)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CSU5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18239.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L2_037_000G1_scaffold_730_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1365..2309)
DNA (945bp) protein (315aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
UTP-glucose-1-phosphate uridylyltransferase n=6 Tax=Clostridium perfringens RepID=H7CSU4_CLOPF
galF; UTP-glucose-1-phosphate uridylyltransferase
L2_037_000G1_scaffold_730_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2591..3607)
DNA (1017bp) protein (339aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EDS80918.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EDS80918.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGV8_CLOPF
L2_037_000G1_scaffold_730_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3685..5928)
DNA (2244bp) protein (748aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTW2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80214.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_037_000G1_scaffold_730_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6349..6996)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XN31_CLOPE
RNA polymerase sigma factor
Uncharacterized protein {ECO:0000313|EMBL:BAB80213.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_037_000G1_scaffold_730_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7366..8286)
DNA (921bp) protein (307aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP-glucose-1-phosphate uridylyltransferase n=3 Tax=Clostridium perfringens RepID=B1BGV2_CLOPF
L2_037_000G1_scaffold_730_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8487..8951)
DNA (465bp) protein (155aa)
Transcriptional regulator, LytR family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGV1_CLOPF
Transcriptional regulator, LytR family {ECO:0000313|EMBL:EDS80935.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
transcriptional regulator, LytR family
L2_037_000G1_scaffold_730_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8935..9366)
DNA (432bp) protein (144aa)
Transcriptional regulator, LytR family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGV1_CLOPF
Transcriptional regulator, LytR family {ECO:0000313|EMBL:EDS80935.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
transcriptional regulator, LytR family
L2_037_000G1_scaffold_730_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9760..11241
DNA (1482bp) protein (494aa)
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:EDS80917.1}; EC=1.1.1.22 {ECO:0000313|EMBL:EDS80917.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
nucleotide sugar dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGU7_CLOPF
L2_037_000G1_scaffold_730_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11295..12386)
DNA (1092bp) protein (364aa)
UDP-glucuronate 5'-epimerase (UDP-glucuronic acidepimerase) {ECO:0000313|EMBL:EDS81000.1}; EC=5.1.3.12 {ECO:0000313|EMBL:EDS81000.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
UDP-glucuronate 5'-epimerase (UDP-glucuronic acidepimerase) n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGU6_CLOPF
NAD-dependent epimerase/dehydratase
L2_037_000G1_scaffold_730_11
Proteus mirabilis, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12721..13626)
DNA (906bp) protein (302aa)
glycosyl transferase n=1 Tax=Proteus mirabilis RepID=UPI00037CB4CA
WemB {ECO:0000313|EMBL:ADL32277.1}; TaxID=584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus mirabilis.;"
wemI; WemI
L2_037_000G1_scaffold_730_12
unknown

Not on your lists

comp(13698..13886)
DNA (189bp) protein (63aa)

This feature has no annotations

L2_037_000G1_scaffold_730_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13852..15270)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VIK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90229.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L2_037_000G1_scaffold_730_14
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15337..16479)
DNA (1143bp) protein (381aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7N164_9FIRM
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:CDF06281.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein
L2_037_000G1_scaffold_730_15
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16497..17588)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5C7Y7_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG51055.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
hypothetical protein
L2_037_000G1_scaffold_730_16
unknown

Not on your lists

comp(17585..18898)
DNA (1314bp) protein (438aa)

This feature has no annotations

L2_037_000G1_scaffold_730_17
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18911..19960)
DNA (1050bp) protein (350aa)
epsJ1; putative glycosyl transferase (EC:2.4.-.-)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3B163_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89635.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
L2_037_000G1_scaffold_730_18
Streptococcus suis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19972..20502)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RM82_9FIRM
Maltose O-acetyltransferase {ECO:0000313|EMBL:AKE80358.1}; TaxID=1307 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus suis.;"
Acetyltransferase (isoleucine patch superfamily)
L2_037_000G1_scaffold_730_19
Streptococcus suis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20504..21472)
DNA (969bp) protein (323aa)
cell wall biosynthesis glycosyltransferase n=1 Tax=Bacteroides faecis RepID=UPI000262E913
Glycosyltransferase {ECO:0000313|EMBL:AKE79178.1}; TaxID=1307 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus suis.;"
glycosyl transferase GT2 family
L2_037_000G1_scaffold_730_20
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21482..22300)
DNA (819bp) protein (273aa)
Glycosyl transferase family 2 n=1 Tax=Veillonella sp. CAG:933 RepID=R5BEW8_9FIRM
Glycosyl transferase family 2 {ECO:0000313|EMBL:CCX53903.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
glycosyl transferase family protein
L2_037_000G1_scaffold_730_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22350..23060)
DNA (711bp) protein (237aa)
Glycosyltransferase Family 2 protein (EC:2.7.-.-)
UDP-galactose phosphate transferase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGT1_CLOPF
UDP-galactose phosphate transferase {ECO:0000313|EMBL:EDS80969.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L2_037_000G1_scaffold_730_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23076..24335)
DNA (1260bp) protein (420aa)
Aminotransferase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGT0_CLOPF
Aminotransferase {ECO:0000313|EMBL:EDS80910.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
aminotransferase
L2_037_000G1_scaffold_730_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24536..26431)
DNA (1896bp) protein (632aa)
Capsular polysaccharide biosynthesis protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGS9_CLOPF
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDS81057.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
3-beta hydroxysteroid dehydrogenase/isomerase family protein
L2_037_000G1_scaffold_730_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26609..27262)
DNA (654bp) protein (218aa)
Capsular polysaccharide biosynthsis protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XN46_CLOPE
capsular polysaccharide biosynthsis protein
Capsular polysaccharide biosynthsis protein {ECO:0000313|EMBL:BAB80198.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_037_000G1_scaffold_730_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27276..27974)
DNA (699bp) protein (233aa)
Capsular polysaccharide biosynthsis protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XN47_CLOPE
capsular polysaccharide biosynthsis protein
Capsular polysaccharide biosynthsis protein {ECO:0000313|EMBL:BAB80197.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L2_037_000G1_scaffold_730_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28464..28877)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDG1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27917.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L2_037_000G1_scaffold_730_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29698..30765)
DNA (1068bp) protein (356aa)
Putative membrane protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R3X8_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT25009.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L2_037_000G1_scaffold_730_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31164..31472
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R3X9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT24917.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L2_037_000G1_scaffold_730_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31674..33905)
DNA (2232bp) protein (744aa)
sensor histidine kinase (EC:2.7.3.-)
Sensor histidine kinase {ECO:0000313|EMBL:EDT25002.1}; EC=2.7.3.- {ECO:0000313|EMBL:EDT25002.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Sensor histidine kinase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTX3_CLOP1
L2_037_000G1_scaffold_730_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33880..34584)
DNA (705bp) protein (235aa)
DNA-binding response regulator n=4 Tax=Clostridium perfringens RepID=H7CSP4_CLOPF
DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:EDT72587.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Displaying items 1-30 of 89 in total

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