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L2_037_000G1_scaffold_1255

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000G1_scaffold_1255_1
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..167
DNA (165bp) protein (55aa)
Macro domain protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CRQ4_9FIRM
Macro domain protein {ECO:0000313|EMBL:EDY31992.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L2_037_000G1_scaffold_1255_2
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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249..458
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AYW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86917.1}; Flags: Fragment;; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L2_037_000G1_scaffold_1255_3
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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1063..1815
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H912_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21417.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
endonuclease/exonuclease/phosphatase
L2_037_000G1_scaffold_1255_4
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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2007..2330
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GW22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21418.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L2_037_000G1_scaffold_1255_5
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(2562..4328)
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H032_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21419.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
PHP domain-containing protein
L2_037_000G1_scaffold_1255_6
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(4402..5433)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GVN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21420.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L2_037_000G1_scaffold_1255_7
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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5831..6574
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H9I6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21421.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
sugar kinase, ribokinase
L2_037_000G1_scaffold_1255_8
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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6571..7935
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H918_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21422.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
glycoside hydrolase family protein
L2_037_000G1_scaffold_1255_9
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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8136..9128
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GW26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21423.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
LacI family transcriptional regulator
L2_037_000G1_scaffold_1255_10
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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9208..11517
DNA (2310bp) protein (770aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
glgP1; glycogen phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H037_9FIRM
L2_037_000G1_scaffold_1255_11
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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11728..13197
DNA (1470bp) protein (490aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GVP3_9FIRM
L2_037_000G1_scaffold_1255_12
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(13319..13768)
DNA (450bp) protein (150aa)
Adenylate cyclase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H9J1_9FIRM
Adenylate cyclase {ECO:0000313|EMBL:CCY21426.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
adenylate cyclase
L2_037_000G1_scaffold_1255_13
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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14039..14590
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H924_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21427.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
DJ-1 family protein
L2_037_000G1_scaffold_1255_14
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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14649..15026
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GW31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21428.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
FOG: CBS domain
L2_037_000G1_scaffold_1255_15
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15069..15896
DNA (828bp) protein (276aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AN69_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERI67269.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
AraC family transcriptional regulator
L2_037_000G1_scaffold_1255_16
unknown

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15893..16048
DNA (156bp) protein (52aa)

This feature has no annotations

L2_037_000G1_scaffold_1255_17
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16101..18377
DNA (2277bp) protein (759aa)
Pyruvate-formate lyase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FN65_9CLOT
Pyruvate-formate lyase {ECO:0000313|EMBL:EMS73685.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
pyruvate formate-lyase PFL
L2_037_000G1_scaffold_1255_18
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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18429..19403
DNA (975bp) protein (325aa)
glycyl-radical enzyme activating protein family (EC:1.97.1.4)
Glycyl-radical enzyme activating protein family n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KCP5_9FIRM
Tax=GWB2_Bacteroidetes_41_8_curated
L2_037_000G1_scaffold_1255_19
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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19573..21390
DNA (1818bp) protein (606aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Elongation factor 4 n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H043_9FIRM
GTP-binding protein LepA
L2_037_000G1_scaffold_1255_20
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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21395..22609
DNA (1215bp) protein (405aa)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GVP8_9FIRM
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CCY21430.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
oxygen-independent coproporphyrinogen III oxidase
L2_037_000G1_scaffold_1255_21
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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22624..23673
DNA (1050bp) protein (350aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
tRNA-dihydrouridine synthase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H932_9FIRM
dihydrouridine synthase DuS
L2_037_000G1_scaffold_1255_22
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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23844..24476
DNA (633bp) protein (211aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GW35_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
FliA/WhiG family RNA polymerase sigma factor
L2_037_000G1_scaffold_1255_23
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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24563..26221
DNA (1659bp) protein (553aa)
Mg chelatase n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H047_9FIRM
Mg chelatase {ECO:0000313|EMBL:CCY21434.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Mg chelatase-like protein
L2_037_000G1_scaffold_1255_24
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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26279..27499
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GVQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21435.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
dprA; DNA protecting protein DprA
L2_037_000G1_scaffold_1255_25
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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27581..29665
DNA (2085bp) protein (695aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H9K4_9FIRM
L2_037_000G1_scaffold_1255_26
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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29687..30463
DNA (777bp) protein (259aa)
GTP-sensing transcriptional pleiotropic repressor CodY n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H937_9FIRM
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
codY; GTP-sensing transcriptional pleiotropic repressor CodY
L2_037_000G1_scaffold_1255_27
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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30659..31420
DNA (762bp) protein (254aa)
30S ribosomal protein S2 n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GW40_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
SSU ribosomal protein S2P
L2_037_000G1_scaffold_1255_28
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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31474..32400
DNA (927bp) protein (309aa)
Elongation factor Ts n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H052_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
translation elongation factor Ts (EF-Ts)
L2_037_000G1_scaffold_1255_29
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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32654..34333
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GVR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21440.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
ATPase
L2_037_000G1_scaffold_1255_30
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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34343..35077
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H9L1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY21441.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
Displaying items 1-30 of 37 in total

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