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L2_037_000G1_scaffold_1465

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000G1_scaffold_1465_1
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

382..582
DNA (201bp) protein (67aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04568.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_037_000G1_scaffold_1465_2
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

732..1346
DNA (615bp) protein (205aa)
Cellulose-binding family II n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZC3_9FIRM
Cellulose-binding family II {ECO:0000313|EMBL:CDC65335.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
cellulose-binding family II protein
L2_037_000G1_scaffold_1465_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1406..2032
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SVS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65333.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_037_000G1_scaffold_1465_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2053..2961
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65329.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_037_000G1_scaffold_1465_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2977..3267
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U3A7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65327.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_037_000G1_scaffold_1465_6
unknown

Not on your lists

3305..3499
DNA (195bp) protein (65aa)

This feature has no annotations

L2_037_000G1_scaffold_1465_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3496..3951
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65325.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_037_000G1_scaffold_1465_8
unknown

Not on your lists

4071..4271
DNA (201bp) protein (67aa)

This feature has no annotations

L2_037_000G1_scaffold_1465_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4313..4915
DNA (603bp) protein (201aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04570.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_037_000G1_scaffold_1465_10
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4908..5648
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65329.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_037_000G1_scaffold_1465_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5664..5909
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U3A7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65327.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_037_000G1_scaffold_1465_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6098..6412)
DNA (315bp) protein (105aa)
Cellulase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TJ36_9FIRM
Cellulase {ECO:0000313|EMBL:CDC67861.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
cel; cellulase
L2_037_000G1_scaffold_1465_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6558..7184
DNA (627bp) protein (209aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAQ1_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDC67862.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Transcriptional regulator, TetR family
L2_037_000G1_scaffold_1465_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7338..8039
DNA (702bp) protein (234aa)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T360_9FIRM
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCO04574.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_037_000G1_scaffold_1465_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8039..10651
DNA (2613bp) protein (871aa)
putative permease (EC:3.6.3.-)
Putative permease {ECO:0000313|EMBL:CCO04575.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCO04575.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
X-X-X-Leu-X-X-Gly heptad repeats n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDS9_9FIRM
L2_037_000G1_scaffold_1465_16
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10766..11689)
DNA (924bp) protein (308aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6L6_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDC67865.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_037_000G1_scaffold_1465_17
unknown

Not on your lists

comp(11801..12388)
DNA (588bp) protein (196aa)

This feature has no annotations

L2_037_000G1_scaffold_1465_18
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12539..13771
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TJ42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67866.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
alcohol dehydrogenase
L2_037_000G1_scaffold_1465_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13809..14804)
DNA (996bp) protein (332aa)
Aldo/keto reductase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAQ7_9FIRM
Aldo-keto reductase
Aldo-keto reductase {ECO:0000313|EMBL:CCO04579.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_037_000G1_scaffold_1465_20
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14915..16534
DNA (1620bp) protein (540aa)
Dockerin type I repeat protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T366_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCO04580.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
hypothetical protein predicted by Glimmer/Critica
L2_037_000G1_scaffold_1465_21
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16828..18192
DNA (1365bp) protein (455aa)
Permeases n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TDT4_9FIRM
putative permease
Putative permease {ECO:0000313|EMBL:CCO04581.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_037_000G1_scaffold_1465_22
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18311..19366)
DNA (1056bp) protein (352aa)
GDSL-like Lipase/Acylhydrolase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6M0_9FIRM
GDSL-like Lipase/Acylhydrolase {ECO:0000313|EMBL:CDC67870.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Carbohydrate Esterase Family 2 protein
L2_037_000G1_scaffold_1465_23
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19473..20639)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7GW58_9FIRM
putative ABC transporter membrane component
Putative ABC transporter membrane component {ECO:0000313|EMBL:CCO04583.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_037_000G1_scaffold_1465_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20626..21747)
DNA (1122bp) protein (374aa)
ABC-2 type transporter n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TJ48_9FIRM
Putative ABC transporter membrane component
Putative ABC transporter membrane component {ECO:0000313|EMBL:CCO04584.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_037_000G1_scaffold_1465_25
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21752..22699)
DNA (948bp) protein (316aa)
ABC transporter related protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6UAR2_9FIRM
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCO04585.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_037_000G1_scaffold_1465_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22838..24130)
DNA (1293bp) protein (431aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Ruminococcus albus 8 RepID=E9SCV5_RUMAL
histidine kinase
Histidine kinase {ECO:0000313|EMBL:CCO04586.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_037_000G1_scaffold_1465_27
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24123..24803)
DNA (681bp) protein (227aa)
Two component transcriptional regulator winged helix family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAG1_9FIRM
Response regulator
Response regulator {ECO:0000313|EMBL:CCO04587.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_037_000G1_scaffold_1465_28
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24956..26104)
DNA (1149bp) protein (383aa)
lactal_redase; lactaldehyde reductase (EC:1.1.1.77)
Lactaldehyde reductase {ECO:0000313|EMBL:CCO04588.1}; EC=1.1.1.77 {ECO:0000313|EMBL:CCO04588.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Lactaldehyde reductase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SUA9_9FIRM
L2_037_000G1_scaffold_1465_29
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26548..28365
DNA (1818bp) protein (606aa)
GTP-binding protein TypA n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAG6_9FIRM
typA; GTP-binding protein TypA
GTP-binding protein TypA {ECO:0000313|EMBL:CCO04589.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_037_000G1_scaffold_1465_30
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28426..29049)
DNA (624bp) protein (208aa)
Two component transcriptional regulator LuxR family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZE6_9FIRM
Two component transcriptional regulator LuxR family {ECO:0000313|EMBL:CDC66513.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
two component transcriptional regulator
Displaying items 1-30 of 37 in total

View Taxonomy