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L2_037_000M1_scaffold_1003

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_1003_1
unknown

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1..108
DNA (108bp) protein (36aa)

This feature has no annotations

L2_037_000M1_scaffold_1003_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(141..1637)
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 615 RepID=K1FWA8_BACFG
Uncharacterized protein {ECO:0000313|EMBL:KDS47757.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
transposase
L2_037_000M1_scaffold_1003_3
unknown

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1653..1814
DNA (162bp) protein (54aa)

This feature has no annotations

L2_037_000M1_scaffold_1003_4
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1851..4616)
DNA (2766bp) protein (922aa)
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EET15059.2}; EC=2.7.9.1 {ECO:0000313|EMBL:EET15059.2};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=2 Tax=Bacteroides RepID=C6Z2F0_9BACE
L2_037_000M1_scaffold_1003_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4770..6191
DNA (1422bp) protein (474aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=3 Tax=Bacteroides RepID=I9IMZ6_BACVU
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EOS01716.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
RNA methyltransferase
L2_037_000M1_scaffold_1003_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6236..7162
DNA (927bp) protein (309aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
Putative RNA pseudouridylate synthase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L5L8_BACV8
RNA pseudouridylate synthase
L2_037_000M1_scaffold_1003_7
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7553..7723)
DNA (171bp) protein (57aa)
Putative uncharacterized protein n=1 Tax=Bacteroides dorei DSM 17855 RepID=B6W1W2_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB24039.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L2_037_000M1_scaffold_1003_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8281..10401)
DNA (2121bp) protein (707aa)
Prolyl oligopeptidase family protein n=3 Tax=root RepID=A6L5L7_BACV8
prolyl oligopeptidase
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:KDS47762.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L2_037_000M1_scaffold_1003_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10466..10699
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9TZA9_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY74833.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_037_000M1_scaffold_1003_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10629..12494)
DNA (1866bp) protein (622aa)
Membrane protein insertase YidC n=7 Tax=root RepID=YIDC_BACV8
inner membrane protein translocase component YidC
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L2_037_000M1_scaffold_1003_11
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12534..14132)
DNA (1599bp) protein (533aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
CTP synthase n=7 Tax=Bacteroides RepID=A6L5L5_BACV8
L2_037_000M1_scaffold_1003_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14360..15736
DNA (1377bp) protein (459aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8ZH55_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY74830.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L2_037_000M1_scaffold_1003_13
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15837..16925)
DNA (1089bp) protein (363aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EET15066.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EET15066.1};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=C6Z2F7_9BACE
UDP-N-acetylglucosamine 2-epimerase
L2_037_000M1_scaffold_1003_14
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17009..17623
DNA (615bp) protein (205aa)
Uncharacterized protein n=16 Tax=Bacteroides RepID=A6L5L2_BACV8
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EEO61691.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
L2_037_000M1_scaffold_1003_15

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17782..18285
DNA (504bp) protein (168aa)
Sigma-70 region 2 n=14 Tax=root RepID=C3Q293_9BACE
RNA polymerase sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EKC50010.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_037_000M1_scaffold_1003_16
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18475..20250
DNA (1776bp) protein (592aa)
Pyruvate carboxylase subunit B n=5 Tax=Bacteroides RepID=A6L5K8_BACV8
pyruvate carboxylase subunit B
HMGL-like protein {ECO:0000313|EMBL:CDF17878.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L2_037_000M1_scaffold_1003_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20375..21259
DNA (885bp) protein (295aa)
Xylanase n=6 Tax=Bacteroides RepID=E5URK9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS47771.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
xylanase
L2_037_000M1_scaffold_1003_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21231..21953)
DNA (723bp) protein (241aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=6 Tax=Bacteroides RepID=A6L5K6_BACV8
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase
L2_037_000M1_scaffold_1003_19
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22083..22802)
DNA (720bp) protein (240aa)
Outer membrane protein, OmpA family n=12 Tax=Bacteroides RepID=A6L5K5_BACV8
membrane protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEB24814.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L2_037_000M1_scaffold_1003_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22851..24194)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L5K4_BACV8
hypothetical protein
MATE efflux family protein {ECO:0000313|EMBL:EIY74822.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L2_037_000M1_scaffold_1003_21
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(24393..25673)
DNA (1281bp) protein (427aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Serine hydroxymethyltransferase n=7 Tax=Bacteroides RepID=GLYA_BACV8
L2_037_000M1_scaffold_1003_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25901..26419)
DNA (519bp) protein (173aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I8ZH45_BACVU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS01732.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_037_000M1_scaffold_1003_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26429..27016)
DNA (588bp) protein (196aa)
Flavoredoxin n=6 Tax=Bacteroides RepID=A6L5K1_BACV8
flavoredoxin
Flavin reductase like domain protein {ECO:0000313|EMBL:KDS31279.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_037_000M1_scaffold_1003_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27022..27489)
DNA (468bp) protein (156aa)
aspartate carbamoyltransferase regulatory subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase regulatory chain n=7 Tax=Bacteroides RepID=PYRI_BACV8
Aspartate carbamoyltransferase regulatory chain {ECO:0000256|HAMAP-Rule:MF_00002}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_037_000M1_scaffold_1003_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27498..28439)
DNA (942bp) protein (314aa)
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Aspartate carbamoyltransferase n=6 Tax=Bacteroides RepID=PYRB_BACV8
L2_037_000M1_scaffold_1003_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28600..30927
DNA (2328bp) protein (776aa)
Glycosyltransferase family 51, candidate bifunctional family GT51 beta-glycosyltransferase/PBP transpeptidase n=6 Tax=Bacteroides RepID=A6L5J8_BACV8
glycosyl transferase family protein
Penicillin-binding protein 1A {ECO:0000313|EMBL:EOS01736.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_037_000M1_scaffold_1003_27
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31134..31961
DNA (828bp) protein (276aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L5J7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EET15080.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L2_037_000M1_scaffold_1003_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32036..32959)
DNA (924bp) protein (308aa)
Transcriptional regulator n=3 Tax=Bacteroides RepID=E5URJ9_9BACE
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDS47782.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
transcriptional regulator
L2_037_000M1_scaffold_1003_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33111..33767)
DNA (657bp) protein (219aa)
translaldolase (EC:2.2.1.2)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Probable transaldolase n=6 Tax=Bacteroides RepID=TAL_BACV8
L2_037_000M1_scaffold_1003_30
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33864..34970)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8ZIL8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:CDF17864.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
ABC transporter permease
Displaying items 1-30 of 35 in total

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