ggKbase home page

L2_037_000M1_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 321 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_0_1
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(249..3143)
DNA (2895bp) protein (965aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X7G6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ66356.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
peptidase M16
L2_037_000M1_scaffold_0_2
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3232..3954
DNA (723bp) protein (241aa)
Secreted protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EQ27_9BACE
Secreted protein {ECO:0000313|EMBL:CCX94598.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L2_037_000M1_scaffold_0_3
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4487..5734)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X4P4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ66353.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L2_037_000M1_scaffold_0_4
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5721..6410)
DNA (690bp) protein (230aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Type III pantothenate kinase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F444_9BACE
pantothenate kinase
L2_037_000M1_scaffold_0_5
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7145..7528
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ESL4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX94359.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L2_037_000M1_scaffold_0_6
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8450..8617)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X7G4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ66351.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
L2_037_000M1_scaffold_0_7
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8790..11774
DNA (2985bp) protein (995aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XR55_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EJZ66350.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L2_037_000M1_scaffold_0_8
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11798..13267
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XEP9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ66349.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L2_037_000M1_scaffold_0_9
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13287..14150
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ESB8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95545.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L2_037_000M1_scaffold_0_10
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14166..15584
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F5S4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95546.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L2_037_000M1_scaffold_0_11
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15900..16013
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X7F9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ66346.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
L2_037_000M1_scaffold_0_12
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17055..18716
DNA (1662bp) protein (554aa)
Por secretion system C-terminal sorting domain-containing protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XR49_9PORP
Por secretion system C-terminal sorting domain-containing protein {ECO:0000313|EMBL:EJZ66345.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L2_037_000M1_scaffold_0_13
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19325..19975
DNA (651bp) protein (217aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0XEP4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX94516.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L2_037_000M1_scaffold_0_14
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19972..21231
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F175_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX94517.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hemolysin
L2_037_000M1_scaffold_0_15
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21349..23445
DNA (2097bp) protein (699aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EPW4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX94518.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L2_037_000M1_scaffold_0_16
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23541..24566
DNA (1026bp) protein (342aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ET89_9BACE
50S rRNA methyltransferase
L2_037_000M1_scaffold_0_17
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24690..25790
DNA (1101bp) protein (367aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EPE0_9BACE
4-hydroxythreonine-4-phosphate dehydrogenase
L2_037_000M1_scaffold_0_18
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25883..27079
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F2S1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX94521.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
saccharopine dehydrogenase
L2_037_000M1_scaffold_0_19
unknown

Not on your lists

28087..28185
DNA (99bp) protein (33aa)

This feature has no annotations

L2_037_000M1_scaffold_0_20
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28301..28915
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X4N3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ66338.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
TetR family transcriptional regulator
L2_037_000M1_scaffold_0_21
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28922..30202
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EPW9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX94523.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
transporter
L2_037_000M1_scaffold_0_22
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30215..31108
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0X7F2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX94524.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
membrane protein
L2_037_000M1_scaffold_0_23
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31130..32047
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XR39_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ66335.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
ATPase
L2_037_000M1_scaffold_0_24
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32040..32780
DNA (741bp) protein (247aa)
ABC transporter ATP binding/permease protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F2S6_9BACE
ABC transporter ATP binding/permease protein {ECO:0000313|EMBL:CCX94526.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
ABC transporter
L2_037_000M1_scaffold_0_25
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32783..33877
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F181_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX94527.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
multidrug ABC transporter permease
L2_037_000M1_scaffold_0_26
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33880..34983
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EPX4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX94528.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
ABC transporter permease
L2_037_000M1_scaffold_0_27
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35128..35316)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ET97_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX94529.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L2_037_000M1_scaffold_0_28
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35330..35659)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 PF0_9BACE">RepID=R5EPF0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX94530.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L2_037_000M1_scaffold_0_29
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35943..36086)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F2T4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX94531.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L2_037_000M1_scaffold_0_30
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36407..36862
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F185_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX94532.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
thiol peroxidase
Displaying items 1-30 of 321 in total

View Taxonomy