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L2_037_000M1_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 223 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_4_1
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..290)
DNA (288bp) protein (96aa)
Uncharacterized protein (Fragment) n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WXX7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ64078.1}; Flags: Fragment;; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
L2_037_000M1_scaffold_4_2
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(582..1370)
DNA (789bp) protein (263aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0WWW0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95272.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
phosphonate ABC transporter ATP-binding protein
L2_037_000M1_scaffold_4_3
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1370..2116)
DNA (747bp) protein (249aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0WWQ4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ63728.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
ABC transporter permease
L2_037_000M1_scaffold_4_4
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2365..3201
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0X7T2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95270.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
ABC transporter ATP-binding protein
L2_037_000M1_scaffold_4_5
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3160..4059)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EVA3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95269.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
peptidase
L2_037_000M1_scaffold_4_6
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4285..4875
DNA (591bp) protein (197aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hisH; imidazole glycerol phosphate synthase (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F3B1_9BACE
L2_037_000M1_scaffold_4_7
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4872..5615
DNA (744bp) protein (248aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Bacteroidales RepID=K0WWR1_9PORP
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
L2_037_000M1_scaffold_4_8
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5605..6360
DNA (756bp) protein (252aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
imidazole glycerol phosphate synthase (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X7T6_9PORP
L2_037_000M1_scaffold_4_9
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6365..6973
DNA (609bp) protein (203aa)
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19 3.6.1.31)
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EV97_9BACE
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L2_037_000M1_scaffold_4_10
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6980..7651
DNA (672bp) protein (224aa)
Cell division ATP-binding protein FtsE n=2 Tax=Bacteroidales RepID=K0WZJ4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95263.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
phosphonate ABC transporter ATP-binding protein
L2_037_000M1_scaffold_4_11
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7741..9060
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Aspartokinase n=2 Tax=Bacteroidales RepID=K0WWX0_9PORP
aspartate kinase
L2_037_000M1_scaffold_4_12
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9114..10250
DNA (1137bp) protein (379aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Diaminopimelate decarboxylase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F4U1_9BACE
diaminopimelate decarboxylase
L2_037_000M1_scaffold_4_13
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10340..10750
DNA (411bp) protein (137aa)
Transcriptional regulator Fur family n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ERF8_9BACE
Transcriptional regulator Fur family {ECO:0000313|EMBL:CCX95260.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Fur family transcriptional regulator
L2_037_000M1_scaffold_4_14
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10774..11322
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0XIN4_9PORP
Rubrerythrin {ECO:0000313|EMBL:CCX95259.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
rubrerythrin
L2_037_000M1_scaffold_4_15
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11436..13223
DNA (1788bp) protein (596aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
Elongation factor 4 n=2 Tax=Bacteroidales RepID=K0WZJ9_9PORP
GTP-binding protein LepA
L2_037_000M1_scaffold_4_16
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13303..14652
DNA (1350bp) protein (450aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WWX5_9PORP
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
sodium:proton antiporter
L2_037_000M1_scaffold_4_17
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14658..15905)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F4T5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95256.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
ABC transporter permease
L2_037_000M1_scaffold_4_18
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15898..17103)
DNA (1206bp) protein (402aa)
aspartate aminotransferase (EC:2.6.1.1)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0X7U0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ63744.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
L2_037_000M1_scaffold_4_19
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17302..17862
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EV88_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95254.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L2_037_000M1_scaffold_4_20
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17874..18326
DNA (453bp) protein (151aa)
SsrA-binding protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ERT5_9BACE
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
single-stranded DNA-binding protein
L2_037_000M1_scaffold_4_21
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18316..19518)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WWY0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ63747.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
SAM-dependent methyltransferase
L2_037_000M1_scaffold_4_22
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19741..21006)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0WWT0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95251.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L2_037_000M1_scaffold_4_23
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(21042..23540)
DNA (2499bp) protein (833aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
DNA gyrase subunit A n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ERF0_9BACE
DNA gyrase subunit A
L2_037_000M1_scaffold_4_24
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23757..26288
DNA (2532bp) protein (844aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XIP6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ63750.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
ATP-dependent Clp protease ClpC
L2_037_000M1_scaffold_4_25
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26388..28442
DNA (2055bp) protein (685aa)
Uncharacterized protein n=2 Tax=root RepID=K0WZK6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ63751.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
heat shock protein Hsp90
L2_037_000M1_scaffold_4_26
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28578..29492)
DNA (915bp) protein (305aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Dihydroorotate dehydrogenase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5F391_9BACE
diguanylate cyclase
L2_037_000M1_scaffold_4_27
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29480..30259)
DNA (780bp) protein (260aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=2 Tax=Bacteroidales RepID=K0WWT5_9PORP
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
diguanylate cyclase
L2_037_000M1_scaffold_4_28
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30363..30899)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0X7V0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ63754.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L2_037_000M1_scaffold_4_29
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31617..34454)
DNA (2838bp) protein (946aa)
Excinuclease ABC subunit A n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EV79_9BACE
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
excinuclease ABC subunit A
L2_037_000M1_scaffold_4_30
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34433..35380)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ERS3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95243.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
murein transglycosylase
Displaying items 1-30 of 223 in total

View Taxonomy