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L2_037_000M1_scaffold_28

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Displaying items 1-30 of 173 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_28_1
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

151..3297
DNA (3147bp) protein (1049aa)
Putative outer membrane protein, probably involved in nutrient binding n=2 Tax=Bacteroidales RepID=A6LCU9_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KEJ87492.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L2_037_000M1_scaffold_28_2
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3313..5268
DNA (1956bp) protein (652aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LCU8_PARD8
Uncharacterized protein {ECO:0000313|EMBL:EKN32931.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L2_037_000M1_scaffold_28_3
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5378..5743
DNA (366bp) protein (122aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LCU7_PARD8
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09149.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L2_037_000M1_scaffold_28_4
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6209..9376
DNA (3168bp) protein (1056aa)
Outer membrane protein n=2 Tax=Bacteroidales RepID=D7IP12_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFI09150.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L2_037_000M1_scaffold_28_5
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9418..11337
DNA (1920bp) protein (640aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A6LCU5_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KEJ87488.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L2_037_000M1_scaffold_28_6
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11414..12220)
DNA (807bp) protein (269aa)
Pectin acetylesterase n=2 Tax=Bacteroidales RepID=D7IP14_9BACE
xylanase
Uncharacterized protein {ECO:0000313|EMBL:KEJ87487.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L2_037_000M1_scaffold_28_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12389..13270)
DNA (882bp) protein (294aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Malonyl CoA-acyl carrier protein transacylase n=8 Tax=Bacteroidales RepID=A6LCU3_PARD8
malonyl CoA-acyl carrier protein transacylase
L2_037_000M1_scaffold_28_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13410..13604
DNA (195bp) protein (65aa)
Sec-independent protein translocase protein TatA n=9 Tax=Bacteroidales RepID=A6LCU2_PARD8
Sec-independent protein translocase
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_037_000M1_scaffold_28_9
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13626..14438
DNA (813bp) protein (271aa)
Sec-independent protein translocase protein TatC n=6 Tax=Bacteroidales RepID=A6LCU1_PARD8
Sec-independent protein translocase
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L2_037_000M1_scaffold_28_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14507..15379)
DNA (873bp) protein (291aa)
Arginase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LCU0_PARD8
arginase
Arginase {ECO:0000313|EMBL:ABR43504.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_037_000M1_scaffold_28_11
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15498..17804
DNA (2307bp) protein (769aa)
Glycoside hydrolase family 92 n=2 Tax=Bacteroidales RepID=A6LCT9_PARD8
Alpha-1,2-mannosidase family protein {ECO:0000313|EMBL:EFI09157.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
glycoside hydrolase
L2_037_000M1_scaffold_28_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17865..17999)
DNA (135bp) protein (45aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K6AQE8_9PORP
Putative membrane protein {ECO:0000313|EMBL:KDS59715.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L2_037_000M1_scaffold_28_13
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18133..19131
DNA (999bp) protein (333aa)
L-asparaginase {ECO:0000313|EMBL:EFK63410.1}; EC=3.5.1.1 {ECO:0000313|EMBL:EFK63410.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Asparaginase family protein n=3 Tax=Parabacteroides RepID=A6LCT8_PARD8
asparaginase
L2_037_000M1_scaffold_28_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19165..20535
DNA (1371bp) protein (457aa)
DNA repair protein radA n=2 Tax=Bacteroidales RepID=A6LCT7_PARD8
DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_037_000M1_scaffold_28_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20549..22153
DNA (1605bp) protein (535aa)
NAD-utilizing dehydrogenase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LCT6_PARD8
NAD-utilizing dehydrogenase {ECO:0000313|EMBL:ABR43500.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
NAD-utilizing dehydrogenase
L2_037_000M1_scaffold_28_16
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22171..23292
DNA (1122bp) protein (374aa)
Glycoside hydrolase family 43, candidate beta-glycosidase n=3 Tax=Parabacteroides RepID=A6LCT5_PARD8
glycoside hydrolase family protein
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EEU51586.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L2_037_000M1_scaffold_28_17
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23286..23675)
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=C7X8Q8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU51587.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L2_037_000M1_scaffold_28_18
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23688..24497)
DNA (810bp) protein (270aa)
Cyclophilin-type peptidyl-prolyl cis-trans isomerase n=4 Tax=Parabacteroides RepID=A6LCT4_PARD8
cyclophilin type peptidyl-prolyl cis-trans isomerase
Cyclophilin-type peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:CDB49967.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L2_037_000M1_scaffold_28_19
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24552..26282
DNA (1731bp) protein (577aa)
TrkA C-terminal domain protein n=2 Tax=Parabacteroides RepID=C7X8R0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49968.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L2_037_000M1_scaffold_28_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26527..27384
DNA (858bp) protein (286aa)
ROK family transcriptional repressor n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LCT2_PARD8
transcriptional regulator
ROK family transcriptional repressor {ECO:0000313|EMBL:ABR43496.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_037_000M1_scaffold_28_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27425..28336
DNA (912bp) protein (304aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A6LCT1_PARD8
hypothetical protein
Trehalose utilization family protein {ECO:0000313|EMBL:KDS59669.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L2_037_000M1_scaffold_28_22
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28434..30239)
DNA (1806bp) protein (602aa)
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:EEU51592.1}; EC=3.6.1.- {ECO:0000313|EMBL:EEU51592.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
ATP-dependent DNA helicase RecQ n=3 Tax=Parabacteroides RepID=A6LCT0_PARD8
ATP-dependent DNA helicase RecQ
L2_037_000M1_scaffold_28_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30360..32084)
DNA (1725bp) protein (575aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:KDS59767.1}; EC=3.1.-.- {ECO:0000313|EMBL:KDS59767.1};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Single-stranded-DNA-specific exonuclease RecJ n=6 Tax=Bacteroidales RepID=A6LCS9_PARD8
single-stranded-DNA-specific exonuclease RecJ
L2_037_000M1_scaffold_28_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32308..32868
DNA (561bp) protein (187aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LCS8_PARD8
translation factor
Uncharacterized protein {ECO:0000313|EMBL:ABR43492.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L2_037_000M1_scaffold_28_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32871..34271
DNA (1401bp) protein (467aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=6 Tax=Bacteroidales RepID=C7X8R6_9PORP
glycosyltransferase
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase family protein {ECO:0000313|EMBL:KDS59739.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L2_037_000M1_scaffold_28_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34273..36057
DNA (1785bp) protein (595aa)
Chloride channel n=2 Tax=Bacteroidales RepID=D7IP33_9BACE
Putative chloride channel protein {ECO:0000313|EMBL:ABR43490.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
chloride channel protein
L2_037_000M1_scaffold_28_27
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36088..37062
DNA (975bp) protein (325aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Methionyl-tRNA formyltransferase n=2 Tax=Bacteroidales RepID=FMT_PARD8
L2_037_000M1_scaffold_28_28
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37062..37436
DNA (375bp) protein (125aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LCS4_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK63425.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L2_037_000M1_scaffold_28_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37508..38974)
DNA (1467bp) protein (489aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
Catalase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LCS3_PARD8
catalase
L2_037_000M1_scaffold_28_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39361..39456)
DNA (96bp) protein (32aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K6AEW0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25813.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Displaying items 1-30 of 173 in total

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