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L2_037_000M1_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 237 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_42_1
unknown

Not on your lists

401..685
DNA (285bp) protein (95aa)

This feature has no annotations

L2_037_000M1_scaffold_42_2
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(554..1129)
DNA (576bp) protein (192aa)
Sel1 repeat n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DS68_9FIRM
Sel1 repeat.
Sel1 repeat {ECO:0000313|EMBL:CCX83115.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_037_000M1_scaffold_42_3
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1416..2057
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E2U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83117.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_037_000M1_scaffold_42_4
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2136..2522)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DSF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83118.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_037_000M1_scaffold_42_5
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2680..3576)
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7G5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15560.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_42_6
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3829..5184
DNA (1356bp) protein (452aa)
Transporter n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DS82_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Na+-dependent transporters of the SNF family
L2_037_000M1_scaffold_42_7
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5267..5689)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E2W2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83132.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Ion channel.
L2_037_000M1_scaffold_42_8
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5903..6505)
DNA (603bp) protein (201aa)
Radical SAM superfamily n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DW62_9FIRM
Radical SAM superfamily {ECO:0000313|EMBL:CCX83149.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Radical SAM superfamily.
L2_037_000M1_scaffold_42_9
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6536..7087)
DNA (552bp) protein (184aa)
Predicted membrane protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E2X9_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CCX83152.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_037_000M1_scaffold_42_10
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7098..7952)
DNA (855bp) protein (285aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Pyridoxal/pyridoxine/pyridoxamine kinase (EC:2.7.1.35)
Pyridoxal/pyridoxine/pyridoxamine kinase n=2 Tax=Ruminococcus RepID=D4L7G1_9FIRM
L2_037_000M1_scaffold_42_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8112..9671)
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CWN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61152.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_037_000M1_scaffold_42_12
unknown

Not on your lists

comp(9674..10348)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Paenisporosarcina sp. TG-14 RepID=UPI000300E0F8
L2_037_000M1_scaffold_42_13
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10730..10954)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E2Y2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83157.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_037_000M1_scaffold_42_14
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11042..11374)
DNA (333bp) protein (111aa)
Cupin domain n=2 Tax=Ruminococcus RepID=D4L7F8_9FIRM
Cupin domain.
Cupin domain {ECO:0000313|EMBL:CBL15553.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_42_15
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11405..11893)
DNA (489bp) protein (163aa)
Sortase and related acyltransferases n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DW70_9FIRM
Sortase and related acyltransferases {ECO:0000313|EMBL:CCX83159.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Sortase and related acyltransferases
L2_037_000M1_scaffold_42_16
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12201..13382
DNA (1182bp) protein (394aa)
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
S-adenosylmethionine synthase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7F6_9FIRM
L2_037_000M1_scaffold_42_17
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13710..14081)
DNA (372bp) protein (124aa)
Endoribonuclease L-PSP, putative n=2 Tax=Ruminococcus RepID=D4L7F5_9FIRM
endoribonuclease L-PSP, putative
Endoribonuclease L-PSP, putative {ECO:0000313|EMBL:CBL15550.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_42_18
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14119..15312)
DNA (1194bp) protein (398aa)
L-threonine ammonia-lyase (EC:4.3.1.19)
L-threonine ammonia-lyase {ECO:0000313|EMBL:CBL15549.1}; EC=4.3.1.19 {ECO:0000313|EMBL:CBL15549.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L-threonine ammonia-lyase n=2 Tax=Ruminococcus RepID=D4L7F4_9FIRM
L2_037_000M1_scaffold_42_19
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15558..15980)
DNA (423bp) protein (141aa)
Flavodoxin, short chain n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7F3_9FIRM
flavodoxin, short chain
Flavodoxin, short chain {ECO:0000313|EMBL:CBL15548.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_42_20
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16026..16580)
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R5E4S4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15547.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_42_21
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17159..18115)
DNA (957bp) protein (319aa)
AraC-type DNA-binding domain-containing proteins n=2 Tax=root RepID=R5E2Z2_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CCX83167.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
AraC-type DNA-binding domain-containing proteins
L2_037_000M1_scaffold_42_22
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18131..18502)
DNA (372bp) protein (124aa)
Heavy-metal-associated domain n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DSL0_9FIRM
Heavy-metal-associated domain {ECO:0000313|EMBL:CCX83168.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Heavy-metal-associated domain.
L2_037_000M1_scaffold_42_23
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18530..20773)
DNA (2244bp) protein (748aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7E9_9FIRM
ABC-type transport system, involved in lipoprotein release, permease component {ECO:0000313|EMBL:CBL15544.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
ABC-type transport system, involved in lipoprotein release, permease component
L2_037_000M1_scaffold_42_24
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20784..21482)
DNA (699bp) protein (233aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7E8_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBL15543.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_42_25
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21626..21799)
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R5DW79_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15542.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_42_26
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21834..24326)
DNA (2493bp) protein (831aa)
Ferrous iron transporter FeoB n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DSC3_9FIRM
Ferrous iron transporter FeoB {ECO:0000313|EMBL:CCX83170.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
ferrous iron transporter FeoB
L2_037_000M1_scaffold_42_27
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24415..24636)
DNA (222bp) protein (74aa)
Fe2+ transport system protein A n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E4S8_9FIRM
Fe2+ transport system protein A {ECO:0000313|EMBL:CCX83171.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Fe2+ transport system protein A
L2_037_000M1_scaffold_42_28
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24722..24934)
DNA (213bp) protein (71aa)
Fe2+ transport system protein A n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7E4_9FIRM
Fe2+ transport system protein A
Fe2+ transport system protein A {ECO:0000313|EMBL:CBL15539.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_42_29
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25226..25597
DNA (372bp) protein (124aa)
Mn-dependent transcriptional regulator n=2 Tax=Ruminococcus RepID=D4L7E3_9FIRM
Mn-dependent transcriptional regulator
Mn-dependent transcriptional regulator {ECO:0000313|EMBL:CBL15538.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_42_30
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25778..26245)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7E1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15536.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Displaying items 1-30 of 237 in total

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