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L2_037_000M1_scaffold_86

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_86_1
unknown

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2..271
DNA (270bp) protein (90aa)

This feature has no annotations

L2_037_000M1_scaffold_86_2
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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290..550
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LB78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY76398.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
hypothetical protein
L2_037_000M1_scaffold_86_3
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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563..838
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0L1_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN95543.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_037_000M1_scaffold_86_4
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1470..2318)
DNA (849bp) protein (283aa)
Mismatch repair ATPase (MutS family) n=1 Tax=Roseburia sp. CAG:45 RepID=R6PNM3_9FIRM
Mismatch repair ATPase (MutS family) {ECO:0000313|EMBL:CDC11377.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Mismatch repair ATPase (MutS family)
L2_037_000M1_scaffold_86_5
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2563..3510)
DNA (948bp) protein (316aa)
adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase {ECO:0000313|EMBL:CBL14534.1}; EC=3.5.4.4 {ECO:0000313|EMBL:CBL14534.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Adenosine deaminase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L4I9_9FIRM
L2_037_000M1_scaffold_86_6
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4103..6370
DNA (2268bp) protein (756aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
methionine synthase (B12-independent) (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Clostridium sp. CAG:964 RepID=R6V6I5_9CLOT
L2_037_000M1_scaffold_86_7
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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6511..7059
DNA (549bp) protein (183aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Dorea sp. CAG:105 RepID=R5D694_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:CCX75678.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
RNA polymerase sigma factor, sigma-70 family
L2_037_000M1_scaffold_86_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7056..7829
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78230.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_037_000M1_scaffold_86_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7807..8670
DNA (864bp) protein (288aa)
ABC transporter ATP-binding protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V459_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ78231.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type multidrug transport system, ATPase component
L2_037_000M1_scaffold_86_10
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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8667..9782
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VJ30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV17105.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
hypothetical protein
L2_037_000M1_scaffold_86_11
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9811..10920
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3V2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78081.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_037_000M1_scaffold_86_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10995..11660
DNA (666bp) protein (222aa)
Two component transcriptional regulator winged helix family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ98_9FIRM
Two component transcriptional regulator winged helix family {ECO:0000313|EMBL:CCZ78080.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator
L2_037_000M1_scaffold_86_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11706..12020
DNA (315bp) protein (105aa)
DNA damage-inducible protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQR2_9FIRM
DNA damage-inducible protein {ECO:0000313|EMBL:CCZ78079.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
RelB/DinJ family addiction module antitoxin
L2_037_000M1_scaffold_86_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12013..12279
DNA (267bp) protein (89aa)
Addiction module toxin, Txe/YoeB family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H391_9FIRM
Addiction module toxin, Txe/YoeB family {ECO:0000313|EMBL:EEU97571.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Txe/YoeB family addiction module toxin
L2_037_000M1_scaffold_86_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12279..13544
DNA (1266bp) protein (422aa)
sensor histidine kinase (EC:2.7.3.-)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UP57_9FIRM
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:CCZ79870.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_037_000M1_scaffold_86_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13623..14294
DNA (672bp) protein (224aa)
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=Roseburia sp. CAG:18 RepID=R5UVW7_9FIRM
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CCZ79869.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type antimicrobial peptide transport system, ATPase component
L2_037_000M1_scaffold_86_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14297..16852
DNA (2556bp) protein (852aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UNL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79868.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type antimicrobial peptide transport system, permease component
L2_037_000M1_scaffold_86_18
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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17025..19565
DNA (2541bp) protein (847aa)
YhgE/Pip domain protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7E916_9FIRM
YhgE/Pip domain protein {ECO:0000313|EMBL:CDD99220.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
YhgE/Pip N-terminal domain/YhgE/Pip C-terminal domain
L2_037_000M1_scaffold_86_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19562..21748
DNA (2187bp) protein (729aa)
YhgE/Pip domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUF1_9FIRM
YhgE/Pip domain protein {ECO:0000313|EMBL:CCZ79339.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_037_000M1_scaffold_86_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21864..23540
DNA (1677bp) protein (559aa)
Oligo-1 6-glucosidase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM10_9FIRM
Oligo-1 6-glucosidase {ECO:0000313|EMBL:CCZ79338.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glycosidase
L2_037_000M1_scaffold_86_21
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23664..24983
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE37381.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
MATE efflux family protein
L2_037_000M1_scaffold_86_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25138..26052
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UML1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79335.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Abortive infection bacteriophage resistance protein
L2_037_000M1_scaffold_86_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26215..26820
DNA (606bp) protein (202aa)
phosphoserine phosphatase/phosphoserine:homoserine phosphotransferase (EC:2.7.1.39 2.7.1.- 3.1.3.3)
Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUE7_9FIRM
Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein {ECO:0000313|EMBL:CCZ79334.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_037_000M1_scaffold_86_24
unknown

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26853..27044
DNA (192bp) protein (64aa)

This feature has no annotations

L2_037_000M1_scaffold_86_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27191..27517
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79333.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
HcaD; NAD-dependent dehydrogenase
L2_037_000M1_scaffold_86_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27533..29116
DNA (1584bp) protein (528aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Roseburia sp. CAG:18 RepID=R5VF19_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CCZ79332.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L2_037_000M1_scaffold_86_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29138..29479
DNA (342bp) protein (114aa)
BFD domain protein (2Fe-2S)-binding domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V790_9FIRM
BFD domain protein (2Fe-2S)-binding domain protein {ECO:0000313|EMBL:CCZ79331.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
NAD(P)H-nitrite reductase
L2_037_000M1_scaffold_86_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29469..30596
DNA (1128bp) protein (376aa)
FAD dependent oxidoreductase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMK7_9FIRM
FAD dependent oxidoreductase {ECO:0000313|EMBL:CCZ79330.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
glycine/D-amino acid oxidase, deaminating
L2_037_000M1_scaffold_86_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30771..31901
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79329.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_037_000M1_scaffold_86_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31973..32785
DNA (813bp) protein (271aa)
Transcriptional regulator AraC family n=1 Tax=Roseburia sp. CAG:18 RepID=R5ULZ6_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCZ79328.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
transcriptional regulator, AraC family
Displaying items 1-30 of 105 in total

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