ggKbase home page

L2_037_000M1_scaffold_124

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_124_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3..113)
DNA (111bp) protein (37aa)
Peptidase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q8G3_9FIRM
Peptidase {ECO:0000313|EMBL:CCZ24868.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_037_000M1_scaffold_124_2
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

280..1473
DNA (1194bp) protein (398aa)
Transporter, major facilitator family protein n=5 Tax=Erysipelotrichaceae RepID=B0N5C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46715.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
major facilitator superfamily protein
L2_037_000M1_scaffold_124_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1470..2069)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46697.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_037_000M1_scaffold_124_4
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2074..3480)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GAA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05115.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
ROK family transcriptional regulator
L2_037_000M1_scaffold_124_5
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3588..4337)
DNA (750bp) protein (250aa)
Sulfate-transporting ATPase (EC:3.6.3.25)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9QYH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM93214.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L2_037_000M1_scaffold_124_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4318..5598)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QG83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25319.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_037_000M1_scaffold_124_7
unknown

Not on your lists

comp(5611..6057)
DNA (447bp) protein (149aa)

This feature has no annotations

L2_037_000M1_scaffold_124_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6243..7436)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24467.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_037_000M1_scaffold_124_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7433..8128)
DNA (696bp) protein (232aa)
Putative sensory transduction protein LytT n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRV2_9FIRM
Putative sensory transduction protein LytT {ECO:0000313|EMBL:CCZ23727.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Response regulator of the LytR/AlgR family
L2_037_000M1_scaffold_124_10
unknown

Not on your lists

comp(8378..8593)
DNA (216bp) protein (72aa)

This feature has no annotations

L2_037_000M1_scaffold_124_11
unknown

Not on your lists

comp(8621..8827)
DNA (207bp) protein (69aa)

This feature has no annotations

L2_037_000M1_scaffold_124_12
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9021..9938)
DNA (918bp) protein (306aa)
Predicted signal transduction histidine kinase n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GMC8_CLOLD
signal transduction histidine kinase
Predicted signal transduction histidine kinase {ECO:0000313|EMBL:ADK13538.1}; TaxID=748727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC).;"
L2_037_000M1_scaffold_124_13
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9932..10636)
DNA (705bp) protein (235aa)
Putative regulatory protein VanR n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PN05_9CLOT
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EET89338.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
two component transcriptional regulator, winged helix family
L2_037_000M1_scaffold_124_14
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10648..11424)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6P3B1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC04442.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
ABC-2 family transporter protein
L2_037_000M1_scaffold_124_15
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11417..12334)
DNA (918bp) protein (306aa)
ABC transporter related n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MFQ0_ALKOO
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABW17689.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
L2_037_000M1_scaffold_124_16
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12568..13758
DNA (1191bp) protein (397aa)
Fic family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C3X6_9FIRM
Fic family protein {ECO:0000313|EMBL:EDS74360.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L2_037_000M1_scaffold_124_17
unknown

Not on your lists

comp(13860..15026)
DNA (1167bp) protein (389aa)

This feature has no annotations

L2_037_000M1_scaffold_124_18
unknown

Not on your lists

comp(15023..15214)
DNA (192bp) protein (64aa)

This feature has no annotations

L2_037_000M1_scaffold_124_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15224..16546)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QVC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24982.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_037_000M1_scaffold_124_20
unknown

Not on your lists

comp(16608..17597)
DNA (990bp) protein (330aa)

This feature has no annotations

L2_037_000M1_scaffold_124_21
unknown

Not on your lists

comp(17765..17983)
DNA (219bp) protein (73aa)

This feature has no annotations

L2_037_000M1_scaffold_124_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17990..18763)
DNA (774bp) protein (258aa)
Haloacid dehalogenase hydrolase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7E2_9FIRM
Haloacid dehalogenase hydrolase {ECO:0000313|EMBL:CCZ24468.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
HAD-superfamily hydrolase, subfamily IIB
L2_037_000M1_scaffold_124_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18765..19796)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QDS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24469.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
NAD(P)-dependent oxidoreductase
L2_037_000M1_scaffold_124_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19786..20763)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6V1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24470.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
MviM protein
L2_037_000M1_scaffold_124_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20763..21683)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24471.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Predicted dehydrogenases and related proteins
L2_037_000M1_scaffold_124_26
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21680..22414)
DNA (735bp) protein (245aa)
HAD hydrolase family IIB n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTY8_9FIRM
HAD hydrolase family IIB {ECO:0000313|EMBL:CCZ24472.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
HAD-superfamily hydrolase
L2_037_000M1_scaffold_124_27
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22395..22847)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7E9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24473.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L2_037_000M1_scaffold_124_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22966..23760)
DNA (795bp) protein (265aa)
Transcriptional regulator RpiR family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QDT3_9FIRM
Transcriptional regulator RpiR family {ECO:0000313|EMBL:CCZ24474.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
RpiR family regulatory protein
L2_037_000M1_scaffold_124_29
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23760..24494)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24475.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L2_037_000M1_scaffold_124_30
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24562..25092)
DNA (531bp) protein (177aa)
TIGR00730 family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQL0_9FIRM
TIGR00730 family protein {ECO:0000313|EMBL:CCZ24476.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
Displaying items 1-30 of 106 in total

View Taxonomy