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L2_037_000M1_scaffold_178

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_178_1
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..864)
DNA (864bp) protein (288aa)
Transposase, Mutator family n=6 Tax=root RepID=A8SQP2_9FIRM
Transposase, Mutator family {ECO:0000313|EMBL:EDP27029.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
transposase mutator type
L2_037_000M1_scaffold_178_2
Listeria innocua, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(914..1789)
DNA (876bp) protein (292aa)
Putative membrane protein n=1 Tax=Listeria monocytogenes SLCC2376 RepID=J7P6M3_LISMN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHN62041.1}; TaxID=1002366 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria innocua ATCC 33091.;"
L2_037_000M1_scaffold_178_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1866..2270)
DNA (405bp) protein (135aa)
ADP-ribose pyrophosphatase (EC:3.6.1.-)
DNA mismatch repair protein MutT n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002EE491F
Uncharacterized protein {ECO:0000313|EMBL:CDD76491.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_037_000M1_scaffold_178_4
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2293..5379)
DNA (3087bp) protein (1029aa)
Helicase protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PWV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC35732.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
DNA or RNA helicases of superfamily II
L2_037_000M1_scaffold_178_5
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5370..9818)
DNA (4449bp) protein (1483aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR94_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40319.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L2_037_000M1_scaffold_178_6
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9811..10554)
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR95_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40320.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L2_037_000M1_scaffold_178_7
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10554..12167)
DNA (1614bp) protein (538aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR96_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40321.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L2_037_000M1_scaffold_178_8
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12170..13177)
DNA (1008bp) protein (336aa)
Uncharacterized protein conserved in bacteria C-term(DUF2220) n=1 Tax=Roseburia sp. CAG:303 RepID=R7IMC5_9FIRM
Uncharacterized protein conserved in bacteria C-term(DUF2220) {ECO:0000313|EMBL:CDE52671.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
Uncharacterized protein conserved in bacteria C-term(DUF2220).
L2_037_000M1_scaffold_178_9
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13521..15539
DNA (2019bp) protein (673aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36280.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_037_000M1_scaffold_178_10
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15646..16839)
DNA (1194bp) protein (398aa)
Elongation factor Tu n=3 Tax=Eubacterium RepID=EFTU_EUBE2
elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
L2_037_000M1_scaffold_178_11
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16944..19106)
DNA (2163bp) protein (721aa)
Elongation factor G n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z2R8_EUBE2
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
elongation factor G
L2_037_000M1_scaffold_178_12
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19127..19678)
DNA (552bp) protein (184aa)
30S ribosomal protein S7 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC64_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
30S ribosomal protein S7
L2_037_000M1_scaffold_178_13
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19868..20287)
DNA (420bp) protein (140aa)
30S ribosomal protein S12 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBE8_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
rpsL; 30S ribosomal protein S12
L2_037_000M1_scaffold_178_14
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20483..21406)
DNA (924bp) protein (308aa)
LPS biosynthesis protein n=1 Tax=Eubacterium sp. CAG:248 RepID=R6K4V3_9FIRM
LPS biosynthesis protein {ECO:0000313|EMBL:CDB66139.1}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
lipopolysaccharide cholinephosphotransferase
L2_037_000M1_scaffold_178_15
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21492..25172)
DNA (3681bp) protein (1227aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDE1_9FIRM
DNA-directed RNA polymerase subunit beta'
L2_037_000M1_scaffold_178_16
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25190..29146)
DNA (3957bp) protein (1319aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HFJ9_9FIRM
DNA-directed RNA polymerase
L2_037_000M1_scaffold_178_17
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(29492..29857)
DNA (366bp) protein (122aa)
50S ribosomal protein L7/L12 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCB7_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
rplL; 50S ribosomal protein L7/L12
L2_037_000M1_scaffold_178_18
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(29969..30463)
DNA (495bp) protein (165aa)
50S ribosomal protein L10 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC59_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
large subunit ribosomal protein L10
L2_037_000M1_scaffold_178_19
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(30749..31444)
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBE1_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
50S ribosomal protein L1
L2_037_000M1_scaffold_178_20
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(31521..31946)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDD5_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
50S ribosomal protein L11
L2_037_000M1_scaffold_178_21
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32074..32610)
DNA (537bp) protein (179aa)
Transcription termination/antitermination protein NusG n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HFJ4_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
transcriptional antiterminator NusG
L2_037_000M1_scaffold_178_22
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32626..32829)
DNA (204bp) protein (68aa)
Protein translocase subunit SecE n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCB2_9FIRM
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_037_000M1_scaffold_178_23
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33408..34703
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36975.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_037_000M1_scaffold_178_24
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34852..36243)
DNA (1392bp) protein (464aa)
Fatty-acyl-CoA synthase n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBD6_9FIRM
Fatty-acyl-CoA synthase {ECO:0000313|EMBL:CDE36974.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
fatty-acyl-CoA synthase
L2_037_000M1_scaffold_178_25
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36397..37647)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HDD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36973.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_037_000M1_scaffold_178_26
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37668..38237)
DNA (570bp) protein (190aa)
Stage V sporulation protein K n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HFJ0_9FIRM
Stage V sporulation protein K {ECO:0000313|EMBL:CDE36972.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
ATPase
L2_037_000M1_scaffold_178_27
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38284..40830)
DNA (2547bp) protein (849aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HCA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36971.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
LicD family protein
L2_037_000M1_scaffold_178_28
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40873..41922)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36970.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L2_037_000M1_scaffold_178_29
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41941..42642)
DNA (702bp) protein (234aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|SAAS:SAAS00030493};; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HBD1_9FIRM
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L2_037_000M1_scaffold_178_30
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42662..43246)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:252 RepID=R6K908_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB67534.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
hypothetical protein
Displaying items 1-30 of 57 in total

View Taxonomy