ggKbase home page

L2_037_000M1_scaffold_217

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_217_1
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

590..904
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QUR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF41919.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
cyclic di-GMP signal transduction protein
L2_037_000M1_scaffold_217_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1072..2439)
DNA (1368bp) protein (456aa)
Putative efflux protein MATE family n=1 Tax=Roseburia sp. CAG:18 RepID=R5UT22_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CCZ78854.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative efflux protein, MATE family
L2_037_000M1_scaffold_217_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3189..4100
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78853.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_037_000M1_scaffold_217_4
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4125..5213
DNA (1089bp) protein (363aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0N6_ROSHA
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AEN95718.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_037_000M1_scaffold_217_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5226..6242
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78220.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_037_000M1_scaffold_217_6
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6232..7284
DNA (1053bp) protein (351aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0N8_ROSHA
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AEN95720.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_037_000M1_scaffold_217_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7337..9070
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VBS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78222.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_037_000M1_scaffold_217_8
unknown

Not on your lists

comp(8999..9172)
DNA (174bp) protein (58aa)

This feature has no annotations

L2_037_000M1_scaffold_217_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9142..9438)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78223.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_037_000M1_scaffold_217_10
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9536..10261
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5Z9X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25572.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L2_037_000M1_scaffold_217_11
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10285..10842
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YLS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25574.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
Protein of unknown function (DUF1653).
L2_037_000M1_scaffold_217_12
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10843..11295)
DNA (453bp) protein (151aa)
Adenylate cyclase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YFF4_9FIRM
Adenylate cyclase {ECO:0000313|EMBL:CDA25575.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
adenylate cyclase
L2_037_000M1_scaffold_217_13
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11309..12184)
DNA (876bp) protein (292aa)
LysR family transcriptional regulator, transcription activator of glutamate synthase operon n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SZB8_ROSHA
LysR family transcriptional regulator, transcription activator of glutamate synthase operon
LysR family transcriptional regulator, transcription activator of glutamate synthase operon {ECO:0000313|EMBL:AEN95357.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_037_000M1_scaffold_217_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12330..12878
DNA (549bp) protein (183aa)
4-methyl-5(Beta-hydroxyethyl)-thiazole monophosphate synthesis protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQ43_9FIRM
4-methyl-5(Beta-hydroxyethyl)-thiazole monophosphate synthesis protein {ECO:0000313|EMBL:CCZ77899.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein
L2_037_000M1_scaffold_217_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13047..13262
DNA (216bp) protein (72aa)
Small acid-soluble spore proteins alpha/beta type n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIN0_9FIRM
Small acid-soluble spore proteins alpha/beta type {ECO:0000313|EMBL:CCZ77900.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_037_000M1_scaffold_217_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13472..14809
DNA (1338bp) protein (446aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Trigger factor n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3C7_9FIRM
trigger factor
L2_037_000M1_scaffold_217_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14921..15502
DNA (582bp) protein (194aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Roseburia sp. CAG:18 RepID=R5VB08_9FIRM
ATP-dependent Clp protease, proteolytic subunit ClpP
L2_037_000M1_scaffold_217_18
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15563..16849
DNA (1287bp) protein (429aa)
ATP-dependent Clp protease ATP-binding subunit ClpX (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Roseburia sp. CAG:197 RepID=R5YGF0_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
L2_037_000M1_scaffold_217_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16889..19204
DNA (2316bp) protein (772aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Lon protease n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIN6_9FIRM
ATP-dependent protease La
L2_037_000M1_scaffold_217_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19238..19984
DNA (747bp) protein (249aa)
Probable GTP-binding protein EngB n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3D2_9FIRM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ribosome biogenesis GTP-binding protein YsxC/EngB
L2_037_000M1_scaffold_217_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20043..20951
DNA (909bp) protein (303aa)
ABC-type metal ion transport system periplasmic component/surface adhesin n=1 Tax=Roseburia sp. CAG:18 RepID=R5VB14_9FIRM
ABC-type metal ion transport system periplasmic component/surface adhesin {ECO:0000313|EMBL:CCZ77907.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
L2_037_000M1_scaffold_217_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20935..21708
DNA (774bp) protein (258aa)
ABC-type Mn/Zn transport systems, ATPase component (EC:3.6.3.-)
ABC-type Mn/Zn transport systems ATPase component n=1 Tax=Roseburia sp. CAG:18 RepID=R5UI20_9FIRM
ABC-type Mn/Zn transport systems ATPase component {ECO:0000313|EMBL:CCZ77908.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_037_000M1_scaffold_217_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21701..22516
DNA (816bp) protein (272aa)
ABC-3 protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQ55_9FIRM
ABC-3 protein {ECO:0000313|EMBL:CCZ77909.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type Mn2+/Zn2+ transport systems, permease components
L2_037_000M1_scaffold_217_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22591..23466
DNA (876bp) protein (292aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIP2_9FIRM
L2_037_000M1_scaffold_217_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23499..24188
DNA (690bp) protein (230aa)
GntR domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3D9_9FIRM
GntR domain protein {ECO:0000313|EMBL:CCZ77911.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
GntR family transcriptional regulator
L2_037_000M1_scaffold_217_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24292..25776
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VB19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ77912.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Bacillus/Clostridium GerA spore germination protein.
L2_037_000M1_scaffold_217_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25805..26902
DNA (1098bp) protein (366aa)
Spore germination protein n=2 Tax=root RepID=R5UI25_9FIRM
Spore germination protein {ECO:0000313|EMBL:CCZ77913.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Spore germination protein.
L2_037_000M1_scaffold_217_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26892..27551
DNA (660bp) protein (220aa)
Spore germination protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UQ61_9FIRM
Spore germination protein {ECO:0000313|EMBL:CCZ77914.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Spore germination protein.
L2_037_000M1_scaffold_217_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27557..28210
DNA (654bp) protein (218aa)
Stage II sporulation protein R n=1 Tax=Roseburia sp. CAG:18 RepID=R5UIQ0_9FIRM
Stage II sporulation protein R {ECO:0000313|EMBL:CCZ77915.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
stage II sporulation protein R
L2_037_000M1_scaffold_217_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28275..28724
DNA (450bp) protein (150aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Roseburia sp. CAG:18 RepID=R5V3E3_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCZ77916.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
Displaying items 1-30 of 63 in total

View Taxonomy