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L2_037_000M1_scaffold_220

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_220_1
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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201..1211
DNA (1011bp) protein (337aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Clostridium sp. CAG:43 RepID=R7B0S3_9CLOT
L2_037_000M1_scaffold_220_2
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1536..2729
DNA (1194bp) protein (398aa)
Extracellular ligand-binding receptor n=1 Tax=Clostridium sp. CAG:43 RepID=R7ACM3_9CLOT
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CDD56075.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-)
L2_037_000M1_scaffold_220_3
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3020..3901
DNA (882bp) protein (294aa)
Amino acid/amide ABC transporter membrane protein 1 HAAT family (TC 3.A.1.4.-) n=1 Tax=Clostridium sp. CAG:43 RepID=R7A5J7_9CLOT
Amino acid/amide ABC transporter membrane protein 1 HAAT family (TC 3.A.1.4.-) {ECO:0000313|EMBL:CDD56073.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-)
L2_037_000M1_scaffold_220_4
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4014..5078
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7ACL9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD56070.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-)
L2_037_000M1_scaffold_220_5
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5082..5840
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A5I8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD56063.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-)
L2_037_000M1_scaffold_220_6
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5854..6564
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7ARI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD56061.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-)
L2_037_000M1_scaffold_220_7
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6593..8134
DNA (1542bp) protein (514aa)
Stage IV sporulation protein A {ECO:0000256|PIRNR:PIRNR007466}; EC=3.6.1.3 {ECO:0000256|PIRNR:PIRNR007466};; Coat morphogenetic protein SpoIVA {ECO:0000256|PIRNR:PIRNR007466}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Stage IV sporulation protein A n=3 Tax=Clostridium RepID=E7GSY4_CLOSY
stage IV sporulation protein A
L2_037_000M1_scaffold_220_8
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8250..9950
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AZN9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55672.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Predicted exonuclease of the beta-lactamase fold involved in RNA processing
L2_037_000M1_scaffold_220_9
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9984..10457
DNA (474bp) protein (158aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Ribonuclease HI (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Clostridium sp. CAG:43 RepID=R7A4D5_9CLOT
L2_037_000M1_scaffold_220_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10725..11552
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SLC2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04401.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_037_000M1_scaffold_220_11
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


11734..14376
DNA (2643bp) protein (881aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Alanine--tRNA ligase n=1 Tax=Clostridium sp. CAG:43 RepID=R7AQG6_9CLOT
alanyl-tRNA synthetase
L2_037_000M1_scaffold_220_12
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14514..14690
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=13 Tax=Clostridiales RepID=D6DJY4_CLOSC
SSU ribosomal protein S21P
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L2_037_000M1_scaffold_220_13
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14788..16665
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A4E0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55678.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L2_037_000M1_scaffold_220_14
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16728..17000
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AJG9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55679.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L2_037_000M1_scaffold_220_15
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17010..18299
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AQH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55681.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
sporulation protein YqfD
L2_037_000M1_scaffold_220_16
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18274..19308
DNA (1035bp) protein (345aa)
Phosphate starvation-inducible protein PhoH predicted ATPase n=1 Tax=Clostridium sp. CAG:43 RepID=R7B1N7_9CLOT
Phosphate starvation-inducible protein PhoH predicted ATPase {ECO:0000313|EMBL:CDD55682.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Phosphate starvation-inducible protein PhoH, predicted ATPase
L2_037_000M1_scaffold_220_17
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19305..19802
DNA (498bp) protein (166aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Endoribonuclease YbeY n=1 Tax=Clostridium sp. CAG:43 RepID=R7A4E5_9CLOT
conserved hypothetical protein TIGR00043
L2_037_000M1_scaffold_220_18
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19885..21009
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FGR6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04393.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Protein of unknown function (DUF3048).
L2_037_000M1_scaffold_220_19
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20990..22801
DNA (1812bp) protein (604aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7ABF4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55685.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Uncharacterized membrane protein, putative virulence factor
L2_037_000M1_scaffold_220_20
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22877..23254
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AQH7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55686.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L2_037_000M1_scaffold_220_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23384..24583
DNA (1200bp) protein (400aa)
Flavoprotein family protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SLB1_CLOSY
Flavoprotein family protein {ECO:0000313|EMBL:ERI73947.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Predicted flavoproteins
L2_037_000M1_scaffold_220_22
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24580..26262
DNA (1683bp) protein (561aa)
Oxidoreductase n=1 Tax=Clostridium sp. CAG:43 RepID=R7A3B4_9CLOT
Oxidoreductase {ECO:0000313|EMBL:CDD55293.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Uncharacterized FAD-dependent dehydrogenases
L2_037_000M1_scaffold_220_23
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26243..26470
DNA (228bp) protein (76aa)
UPF0291 protein BN653_01098 n=1 Tax=Clostridium sp. CAG:43 RepID=R7AIC6_9CLOT
UPF0291 protein BN653_01098 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L2_037_000M1_scaffold_220_24
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26487..27065
DNA (579bp) protein (193aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5 10-methenyltetrahydrofolate synthetase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCK5_9CLOT
L2_037_000M1_scaffold_220_25
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27361..28845
DNA (1485bp) protein (495aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Clostridium sp. CAG:43 RepID=R7AZG2_9CLOT
tRNA-i(6)A37 thiotransferase enzyme MiaB
L2_037_000M1_scaffold_220_26
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28859..30136
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A3B7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55298.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
ErfK/YbiS/YcfS/YnhG family protein
L2_037_000M1_scaffold_220_27
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30224..32881
DNA (2658bp) protein (886aa)
DNA mismatch repair protein MutS n=2 Tax=Clostridium RepID=G5FGQ4_9CLOT
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
DNA mismatch repair protein MutS
L2_037_000M1_scaffold_220_28
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32914..35010
DNA (2097bp) protein (699aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridium sp. CAG:43 RepID=R7AIE2_9CLOT
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
DNA mismatch repair protein MutL
L2_037_000M1_scaffold_220_29
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35035..36018
DNA (984bp) protein (328aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Clostridium sp. CAG:43 RepID=R7APH3_9CLOT
L2_037_000M1_scaffold_220_30
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36109..37392
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A3D0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD55313.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Cystathionine beta-lyase family protein involved in aluminum resistance
Displaying items 1-30 of 60 in total

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