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L2_037_000M1_scaffold_262

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_262_1
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..411)
DNA (411bp) protein (137aa)
Transporter n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8Y5_9FIRM
Na+-dependent transporters of the SNF family
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_262_2

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comp(589..2673)
DNA (2085bp) protein (695aa)
Type II secretory pathway, pullulanase PulA and related glycosidases (EC:3.2.1.-)
Putative carbohydrate-active enzyme n=1 Tax=uncultured organism RepID=D9ZE48_9ZZZZ
Putative carbohydrate-active enzyme {ECO:0000313|EMBL:ADD61602.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
L2_037_000M1_scaffold_262_3

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comp(2890..4584)
DNA (1695bp) protein (565aa)
Carbohydrate-active enzyme n=1 Tax=uncultured organism RepID=D9ZE49_9ZZZZ
Carbohydrate-active enzyme {ECO:0000313|EMBL:ADD61603.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Glycosidases
L2_037_000M1_scaffold_262_4
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4755..5246
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R5DMG3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16073.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_262_5

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comp(5408..6415)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=root RepID=R5DZM7_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61605.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
L2_037_000M1_scaffold_262_6
unknown

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comp(6400..6588)
DNA (189bp) protein (63aa)

This feature has no annotations

L2_037_000M1_scaffold_262_7

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6610..6975
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZE52_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61606.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
L2_037_000M1_scaffold_262_8

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7087..7626
DNA (540bp) protein (180aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZE53_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61607.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
L2_037_000M1_scaffold_262_9

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7629..8231
DNA (603bp) protein (201aa)
Holliday junction ATP-dependent DNA helicase RuvA n=3 Tax=root RepID=D4L8X6_9FIRM
Holliday junction DNA helicase, RuvA subunit
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61608.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
L2_037_000M1_scaffold_262_10

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8235..9323
DNA (1089bp) protein (363aa)
Holliday junction ATP-dependent DNA helicase RuvB n=3 Tax=root RepID=R5DMG8_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61609.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Holliday junction DNA helicase, RuvB subunit
L2_037_000M1_scaffold_262_11

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9443..10792
DNA (1350bp) protein (450aa)
phosphoglucosamine mutase (EC:5.4.2.10)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZE56_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61610.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
L2_037_000M1_scaffold_262_12

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10792..11655
DNA (864bp) protein (288aa)
Predicted SAM-dependent methyltransferases n=3 Tax=root RepID=D4L8X3_9FIRM
Predicted SAM-dependent methyltransferases
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61611.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
L2_037_000M1_scaffold_262_13
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11659..12504
DNA (846bp) protein (282aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
ABC-type cobalt transport system, ATPase component n=2 Tax=Ruminococcus RepID=D4L8X2_9FIRM
ABC-type cobalt transport system, ATPase component
L2_037_000M1_scaffold_262_14
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12501..13370
DNA (870bp) protein (290aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
ABC-type cobalt transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DZP2_9FIRM
ABC-type cobalt transport system, ATPase component
L2_037_000M1_scaffold_262_15
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13364..14176
DNA (813bp) protein (271aa)
ABC-type cobalt transport system permease component CbiQ and related transporters n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DMK1_9FIRM
ABC-type cobalt transport system permease component CbiQ and related transporters {ECO:0000313|EMBL:CCX81443.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
L2_037_000M1_scaffold_262_16
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14146..14952
DNA (807bp) protein (269aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DMH7_9FIRM
L2_037_000M1_scaffold_262_17
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14945..16240
DNA (1296bp) protein (432aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8W8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL16063.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_262_18
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16246..16920
DNA (675bp) protein (225aa)
Putative colicin V production protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRL8_9FIRM
Putative colicin V production protein {ECO:0000313|EMBL:CCX81449.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Colicin V production protein.
L2_037_000M1_scaffold_262_19
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16921..17562
DNA (642bp) protein (214aa)
Phosphatidylglycerophosphate synthase (EC:2.7.8.5)
Phosphatidylglycerophosphate synthase {ECO:0000313|EMBL:CBL16062.1}; EC=2.7.8.5 {ECO:0000313|EMBL:CBL16062.1};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Phosphatidylglycerophosphate synthase n=2 Tax=Ruminococcus RepID=D4L8W7_9FIRM
L2_037_000M1_scaffold_262_20
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17665..20004
DNA (2340bp) protein (780aa)
ATPases with chaperone activity ATP-binding subunit n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DML1_9FIRM
ATPases with chaperone activity, ATP-binding subunit
ATPases with chaperone activity ATP-binding subunit {ECO:0000313|EMBL:CCX81453.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_037_000M1_scaffold_262_21
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20371..21249)
DNA (879bp) protein (293aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=2 Tax=Ruminococcus RepID=D4L8W5_9FIRM
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL16060.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_262_22
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21249..22127)
DNA (879bp) protein (293aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8W4_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL16059.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_262_23
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22214..23569)
DNA (1356bp) protein (452aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRN2_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CCX81459.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_037_000M1_scaffold_262_24
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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23937..24797
DNA (861bp) protein (287aa)
Predicted integral membrane protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DMJ3_9FIRM
Predicted integral membrane protein {ECO:0000313|EMBL:CCX81460.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Predicted integral membrane protein
L2_037_000M1_scaffold_262_25

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25459..25851
DNA (393bp) protein (131aa)
Predicted transcriptional regulators n=3 Tax=root RepID=D4L8W1_9FIRM
Predicted transcriptional regulators
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EKC63508.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_037_000M1_scaffold_262_26
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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25991..26254
DNA (264bp) protein (88aa)
30S ribosomal protein S15 n=3 Tax=root RepID=D4L8W0_9FIRM
SSU ribosomal protein S15P
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_037_000M1_scaffold_262_27
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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26479..28698
DNA (2220bp) protein (740aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DMM1_9FIRM
L2_037_000M1_scaffold_262_28
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28903..29124)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DRN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81464.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_037_000M1_scaffold_262_29
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29140..29400)
DNA (261bp) protein (87aa)
Cytotoxic translational repressor of toxin-antitoxin stability system n=2 Tax=root RepID=R5DZS8_9FIRM
Cytotoxic translational repressor of toxin-antitoxin stability system {ECO:0000313|EMBL:CCX81466.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Cytotoxic translational repressor of toxin-antitoxin stability system
L2_037_000M1_scaffold_262_30
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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29621..30787
DNA (1167bp) protein (389aa)
Uncharacterized flavoproteins n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8V6_9FIRM
Uncharacterized flavoproteins
Uncharacterized flavoproteins {ECO:0000313|EMBL:CBL16051.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Displaying items 1-30 of 57 in total

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