ggKbase home page

L2_037_000M1_scaffold_264

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_264_1
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

510..3077
DNA (2568bp) protein (856aa)
ATPase, P-type (transporting), HAD superfamily, subfamily IC (EC:3.6.3.8)
Putative calcium-translocating P-type ATPase PMCA-type n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZD7_9FIRM
Putative calcium-translocating P-type ATPase PMCA-type {ECO:0000313|EMBL:CDE20604.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L2_037_000M1_scaffold_264_2
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3068..4225
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62653.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted permease
L2_037_000M1_scaffold_264_3
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4275..4895)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0Z7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20606.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
nucleoside recognition domain containing protein
L2_037_000M1_scaffold_264_4
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5081..5608
DNA (528bp) protein (176aa)
Transporter gate domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G3L5_9FIRM
Transporter gate domain protein {ECO:0000313|EMBL:CDE20607.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Uncharacterized membrane protein
L2_037_000M1_scaffold_264_5
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5645..6382)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62650.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L2_037_000M1_scaffold_264_6
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6568..7932
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62649.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L2_037_000M1_scaffold_264_7
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8021..8665
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BIB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20610.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L2_037_000M1_scaffold_264_8
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8616..11960
DNA (3345bp) protein (1115aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G102_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20611.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
SMC domain-containing protein
L2_037_000M1_scaffold_264_9
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12247..13104)
DNA (858bp) protein (286aa)
Transcriptional regulator AraC family n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1F3_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDE20613.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
xylan 1,4-beta-xylosidase
L2_037_000M1_scaffold_264_10
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13259..13456
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20614.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L2_037_000M1_scaffold_264_11
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13941..14045
DNA (105bp) protein (35aa)
Cyclic nucleotide-binding domain protein n=2 Tax=Dorea RepID=A6BIA8_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:CDE20615.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L2_037_000M1_scaffold_264_12
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14058..14462
DNA (405bp) protein (135aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G106_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:CDE20616.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
CarD family transcriptional regulator
L2_037_000M1_scaffold_264_13
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14991..16346
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G3M5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20617.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted ATPase (AAA+ superfamily)
L2_037_000M1_scaffold_264_14
unknown

Not on your lists

16789..16932
DNA (144bp) protein (48aa)

This feature has no annotations

L2_037_000M1_scaffold_264_15
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16889..17689
DNA (801bp) protein (267aa)
Metallo-beta-lactamase domain protein n=2 Tax=Dorea RepID=A6BIA3_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EDM62638.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Metal-dependent hydrolases of the beta-lactamase superfamily III
L2_037_000M1_scaffold_264_16
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17811..18770)
DNA (960bp) protein (320aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R7FZF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20619.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L2_037_000M1_scaffold_264_17
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19068..19601
DNA (534bp) protein (178aa)
Cupin domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0D5_9FIRM
Cupin domain protein {ECO:0000313|EMBL:CDE20620.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
XRE family transcriptional regulator
L2_037_000M1_scaffold_264_18
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19693..21270
DNA (1578bp) protein (526aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00035095}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00035095};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Polyamine ABC transporter, ATP-binding protein n=2 Tax=Dorea RepID=A6BI99_9FIRM
potA; spermidine/putrescine ABC transporter ATP-binding protein
L2_037_000M1_scaffold_264_19
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21272..22108
DNA (837bp) protein (279aa)
ABC transporter, permease protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI98_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EDM62633.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ABC-type spermidine/putrescine transport system, permease component I
L2_037_000M1_scaffold_264_20
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22114..24006
DNA (1893bp) protein (631aa)
ABC transporter permease protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1G1_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDE20623.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ABC-type spermidine/putrescine transport system, permease component II
L2_037_000M1_scaffold_264_21
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24049..25857)
DNA (1809bp) protein (603aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62631.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L2_037_000M1_scaffold_264_22
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25940..26251)
DNA (312bp) protein (104aa)
Branched-chain amino acid transport protein (AzlD) n=2 Tax=Dorea RepID=A6BI95_9FIRM
Branched-chain amino acid transport protein (AzlD) {ECO:0000313|EMBL:CDE20626.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Branched-chain amino acid transport protein AzlD
L2_037_000M1_scaffold_264_23
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26241..27008)
DNA (768bp) protein (256aa)
AzlC protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G3N7_9FIRM
AzlC protein {ECO:0000313|EMBL:CDE20627.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
branched-chain amino acid permease (azaleucine resistance)
L2_037_000M1_scaffold_264_24
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27300..28325
DNA (1026bp) protein (342aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ABC-type metal ion transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NVA9_9FIRM
ABC-type metal ion transport system, ATPase component
L2_037_000M1_scaffold_264_25
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28325..28993
DNA (669bp) protein (223aa)
ABC-type metal ion transport system, permease component n=1 Tax=Ruminococcus torques L2-14 RepID=D4M391_9FIRM
ABC-type metal ion transport system, permease component
ABC-type metal ion transport system, permease component {ECO:0000313|EMBL:CBL25703.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_037_000M1_scaffold_264_26
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29124..29978
DNA (855bp) protein (285aa)
ABC-type metal ion transport system, periplasmic component/surface antigen n=1 Tax=Ruminococcus torques L2-14 RepID=D4M390_9FIRM
ABC-type metal ion transport system, periplasmic component/surface antigen
ABC-type metal ion transport system, periplasmic component/surface antigen {ECO:0000313|EMBL:CBL25702.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_037_000M1_scaffold_264_27
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30018..31334
DNA (1317bp) protein (439aa)
Amidohydrolase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M389_9FIRM
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:CBL25701.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_037_000M1_scaffold_264_28
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31508..32497
DNA (990bp) protein (330aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI93_9FIRM
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EDM62628.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L2_037_000M1_scaffold_264_29
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


33011..34951
DNA (1941bp) protein (647aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZH8_9FIRM
L2_037_000M1_scaffold_264_30
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35293..36054
DNA (762bp) protein (254aa)
hydrolase, TatD family (EC:3.1.21.-)
Hydrolase TatD family n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0F8_9FIRM
Hydrolase TatD family {ECO:0000313|EMBL:CDE20640.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Displaying items 1-30 of 52 in total

View Taxonomy