ggKbase home page

L2_037_000M1_scaffold_376

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_376_1
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

175..2187
DNA (2013bp) protein (671aa)
Leucine Rich Repeat protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JIJ8_9BACT
Leucine Rich Repeat protein {ECO:0000313|EMBL:CDE63433.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
putative internalin-J
L2_037_000M1_scaffold_376_2
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2246..2791)
DNA (546bp) protein (182aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family {ECO:0000313|EMBL:EDS04077.1}; EC=3.1.3.- {ECO:0000313|EMBL:EDS04077.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVL1_9BACT
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
L2_037_000M1_scaffold_376_3
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2764..3546)
DNA (783bp) protein (261aa)
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVL2_9BACT
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:EDS04078.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L2_037_000M1_scaffold_376_4
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3543..4913)
DNA (1371bp) protein (457aa)
YihY family protein n=2 Tax=root RepID=B0MVL3_9BACT
YihY family protein {ECO:0000313|EMBL:EDS04079.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L2_037_000M1_scaffold_376_5
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4937..6130)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVL4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04080.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
SAM-dependent methyltransferase, tRNA(uracil-5)-methyltransferase
L2_037_000M1_scaffold_376_6
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6085..7884)
DNA (1800bp) protein (600aa)
ComEC/Rec2-like protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVL5_9BACT
ComEC/Rec2-like protein {ECO:0000313|EMBL:EDS04081.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
ComEC/Rec2-like protein
L2_037_000M1_scaffold_376_7
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7936..8802)
DNA (867bp) protein (289aa)
DNA/RNA non-specific endonuclease n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JI70_9BACT
DNA/RNA non-specific endonuclease {ECO:0000313|EMBL:CDE63426.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
DNA/RNA endonuclease G, NUC1
L2_037_000M1_scaffold_376_8
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8926..11052)
DNA (2127bp) protein (709aa)
Uncharacterized protein n=2 Tax=root RepID=B0MVL7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04083.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L2_037_000M1_scaffold_376_9
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11396..14290)
DNA (2895bp) protein (965aa)
Uncharacterized protein n=2 Tax=root RepID=B0MVJ1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04085.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L2_037_000M1_scaffold_376_10
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14415..15560
DNA (1146bp) protein (382aa)
N-acetylmuramoyl-L-alanine amidase n=3 Tax=root RepID=B0MVJ2_9BACT
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDE65283.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
N-acetylmuramoyl-L-alanine amidase
L2_037_000M1_scaffold_376_11
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15583..16584
DNA (1002bp) protein (334aa)
Putative virulence factor Mce family protein n=4 Tax=root RepID=B0MVJ3_9BACT
Putative virulence factor Mce family protein {ECO:0000313|EMBL:CDE65281.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
ABC-type transport system involved in resistance to organic solvents, periplasmic component
L2_037_000M1_scaffold_376_12
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16607..19108
DNA (2502bp) protein (834aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Endonuclease MutS2 n=3 Tax=root RepID=B0MVJ4_9BACT
mismatch repair ATPase
L2_037_000M1_scaffold_376_13
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19137..21509
DNA (2373bp) protein (791aa)
alanine racemase (EC:6.3.2.10)
Alanine racemase n=7 Tax=root RepID=B0MVJ5_9BACT
Alanine racemase {ECO:0000313|EMBL:CDE65275.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L2_037_000M1_scaffold_376_14

Not on your lists

21583..22317
DNA (735bp) protein (245aa)
Tetrapyrrole methylase family protein n=3 Tax=root RepID=K1TXL6_9ZZZZ
Tetrapyrrole methylase family protein {ECO:0000313|EMBL:EKC63971.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
methyltransferase
L2_037_000M1_scaffold_376_15
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22383..23003
DNA (621bp) protein (207aa)
Protein GrpE n=3 Tax=root RepID=B0MVJ7_9BACT
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
molecular chaperone GrpE
L2_037_000M1_scaffold_376_16
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23130..24293
DNA (1164bp) protein (388aa)
Chaperone protein DnaJ n=4 Tax=root RepID=B0MVJ8_9BACT
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
chaperone protein DnaJ
L2_037_000M1_scaffold_376_17
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24527..24916
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=root RepID=B0MVK0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04094.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L2_037_000M1_scaffold_376_18
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24916..26805
DNA (1890bp) protein (630aa)
DNA mismatch repair protein MutL n=2 Tax=root RepID=B0MVK1_9BACT
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
DNA mismatch repair protein MutL
L2_037_000M1_scaffold_376_19
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26861..27502
DNA (642bp) protein (214aa)
Peptidase, S54 family {ECO:0000313|EMBL:EDS04096.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDS04096.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Peptidase, S54 family n=3 Tax=root RepID=B0MVK2_9BACT
Uncharacterized membrane protein (homolog of Drosophila rhomboid)
L2_037_000M1_scaffold_376_20
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27506..28663
DNA (1158bp) protein (386aa)
Endonuclease/exonuclease/phosphatase family protein n=2 Tax=root RepID=B0MVK3_9BACT
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EDS04097.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Metal-dependent hydrolase
L2_037_000M1_scaffold_376_21
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28672..29121
DNA (450bp) protein (150aa)
YhcH/YjgK/YiaL family protein n=2 Tax=Alistipes RepID=B0MVK4_9BACT
YhcH/YjgK/YiaL family protein {ECO:0000313|EMBL:CDE65244.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L2_037_000M1_scaffold_376_22
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29225..30409)
DNA (1185bp) protein (395aa)
Metallo-beta-lactamase domain protein n=3 Tax=root RepID=B0MVN5_9BACT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EDS04099.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
flavoprotein
L2_037_000M1_scaffold_376_23
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30726..33758
DNA (3033bp) protein (1011aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=root RepID=B0MVN6_9BACT
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDS04100.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Outer membrane receptor proteins, mostly Fe transport
L2_037_000M1_scaffold_376_24
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33802..35337
DNA (1536bp) protein (512aa)
Uncharacterized protein n=2 Tax=root RepID=R7JMU6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE65240.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
SusD family.
L2_037_000M1_scaffold_376_25
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35805..37253)
DNA (1449bp) protein (483aa)
Transporter, major facilitator family protein n=2 Tax=root RepID=B0MVL9_9BACT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDS04103.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
arabinose efflux permease family protein
L2_037_000M1_scaffold_376_26
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37467..38003)
DNA (537bp) protein (179aa)
Acetyltransferase, GNAT family n=2 Tax=Alistipes RepID=B0MVM0_9BACT
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDE65238.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
acetyltransferase (GNAT) family protein
L2_037_000M1_scaffold_376_27
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38076..39416)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=2 Tax=root RepID=B0MVM1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04105.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L2_037_000M1_scaffold_376_28
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39423..40703)
DNA (1281bp) protein (427aa)
Transporter, small conductance mechanosensitive ion channel MscS family protein n=4 Tax=root RepID=B0MVM2_9BACT
Transporter small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:CDE65236.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
small-conductance mechanosensitive channel
L2_037_000M1_scaffold_376_29
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41029..41400
DNA (372bp) protein (124aa)
Transcriptional regulator, Spx/MgsR family n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVM4_9BACT
Transcriptional regulator, Spx/MgsR family {ECO:0000313|EMBL:EDS04108.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L2_037_000M1_scaffold_376_30

Not on your lists

comp(41456..42061)
DNA (606bp) protein (202aa)
Flavin reductase-like protein n=2 Tax=root RepID=B0MVM5_9BACT
Protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family {ECO:0000313|EMBL:EKC58666.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
Displaying items 1-30 of 37 in total

View Taxonomy