ggKbase home page

L2_037_000M1_scaffold_404

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_404_1
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(170..1003)
DNA (834bp) protein (278aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DPG5_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CCX82063.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
AraC-type DNA-binding domain-containing proteins
L2_037_000M1_scaffold_404_2
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1033..1893)
DNA (861bp) protein (287aa)
NAD(P)H-hydrate epimerase {ECO:0000256|HAMAP-Rule:MF_01966}; EC=5.1.99.6 {ECO:0000256|HAMAP-Rule:MF_01966};; NAD(P)HX epimerase {ECO:0000256|HAMAP-Rule:MF_01966}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
NAD(P)H-hydrate epimerase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E1I0_9FIRM
yjeF N-terminal region
L2_037_000M1_scaffold_404_3
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1929..2642)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DT88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82059.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_037_000M1_scaffold_404_4
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2854..4098)
DNA (1245bp) protein (415aa)
Fucose 4-O-acetylase and related acetyltransferases n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E1H5_9FIRM
Fucose 4-O-acetylase and related acetyltransferases {ECO:0000313|EMBL:CCX82056.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Fucose 4-O-acetylase and related acetyltransferases
L2_037_000M1_scaffold_404_5
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5060..6088)
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5I1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14876.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_404_6
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6090..7274)
DNA (1185bp) protein (395aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Alanine racemase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5I2_9FIRM
L2_037_000M1_scaffold_404_7
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7688..9208)
DNA (1521bp) protein (507aa)
Transglutaminase-like superfamily n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DXN9_9FIRM
Transglutaminase-like superfamily {ECO:0000313|EMBL:CCX83674.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Transglutaminase-like superfamily.
L2_037_000M1_scaffold_404_8
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9496..9768
DNA (273bp) protein (91aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E4H5_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:CCX83672.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_037_000M1_scaffold_404_9
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9952..11157
DNA (1206bp) protein (402aa)
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5I4_9FIRM
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis {ECO:0000313|EMBL:CBL14879.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_404_10
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11760..12128
DNA (369bp) protein (123aa)
HIRAN domain n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5I5_9FIRM
HIRAN domain.
HIRAN domain {ECO:0000313|EMBL:CBL14880.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_404_11
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12600..13499)
DNA (900bp) protein (300aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R5E317_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14881.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_404_12
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13610..14470)
DNA (861bp) protein (287aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DQU6_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CCX82533.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
AraC-type DNA-binding domain-containing proteins
L2_037_000M1_scaffold_404_13
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14784..15785)
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5I8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14883.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_404_14
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16132..17070)
DNA (939bp) protein (313aa)
Predicted permeases n=2 Tax=Ruminococcus RepID=D4L5I9_9FIRM
Predicted permeases
Predicted permeases {ECO:0000313|EMBL:CBL14884.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_404_15
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17368..17823
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5J0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14885.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_404_16
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18117..19481)
DNA (1365bp) protein (455aa)
Citrate synthase (EC:2.3.3.1 2.3.3.5)
Citrate synthase n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E324_9FIRM
Citrate synthase {ECO:0000313|EMBL:CCX82541.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_037_000M1_scaffold_404_17
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19783..22038)
DNA (2256bp) protein (752aa)
Glycosidases n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E190_9FIRM
Glycosidases {ECO:0000313|EMBL:CCX82542.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Glycosidases
L2_037_000M1_scaffold_404_18
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22300..23112)
DNA (813bp) protein (271aa)
HAD-superfamily hydrolase, subfamily IIB n=2 Tax=Ruminococcus RepID=D4L5J3_9FIRM
HAD-superfamily hydrolase, subfamily IIB
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:CBL14888.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_404_19
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23338..24081)
DNA (744bp) protein (248aa)
signal peptidase I, archaeal type (EC:3.4.21.89)
Signal peptidase I archaeal type n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E328_9FIRM
Signal peptidase I archaeal type {ECO:0000313|EMBL:CCX82546.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_037_000M1_scaffold_404_20
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24757..25902)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82549.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_037_000M1_scaffold_404_21
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25924..29148)
DNA (3225bp) protein (1075aa)
Listeria/Bacterioides repeat n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E333_9FIRM
Listeria/Bacterioides repeat {ECO:0000313|EMBL:CCX82551.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
Listeria/Bacterioides repeat
L2_037_000M1_scaffold_404_22
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29177..31111)
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DQW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82553.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_037_000M1_scaffold_404_23
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31143..32147)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DUL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82554.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_037_000M1_scaffold_404_24
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32157..34703)
DNA (2547bp) protein (849aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E335_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82556.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_037_000M1_scaffold_404_25
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34797..36332)
DNA (1536bp) protein (512aa)
Uncharacterized protein n=2 Tax=root RepID=R5E1A1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82557.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein
L2_037_000M1_scaffold_404_26
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36556..37299)
DNA (744bp) protein (248aa)
signal peptidase I, archaeal type (EC:3.4.21.89)
Signal peptidase I archaeal type n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5DQW8_9FIRM
Signal peptidase I archaeal type {ECO:0000313|EMBL:CCX82558.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_037_000M1_scaffold_404_27
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37344..38105)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L5K1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14896.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L2_037_000M1_scaffold_404_28
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38220..39026)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E426_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82916.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
hypothetical protein predicted by Glimmer/Critica
L2_037_000M1_scaffold_404_29
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39178..39996)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E282_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX82917.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
L2_037_000M1_scaffold_404_30
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40371..40544)
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R5DRV0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14897.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Displaying items 1-30 of 48 in total

View Taxonomy