ggKbase home page

L2_037_000M1_scaffold_478

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_478_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..543)
DNA (543bp) protein (181aa)
Citrate lyase beta subunit (EC:4.1.3.6)
Putative citrate (Pro-3S)-lyase beta subunit n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYD8_9CLOT
Putative citrate (Pro-3S)-lyase beta subunit {ECO:0000313|EMBL:CCY41746.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_037_000M1_scaffold_478_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(540..734)
DNA (195bp) protein (65aa)
citrate lyase acyl carrier protein (EC:4.1.3.6)
Citrate lyase acyl carrier protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYD3_9CLOT
Citrate lyase acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_00805}; Citrate lyase gamma chain {ECO:0000256|HAMAP-Rule:MF_00805}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_037_000M1_scaffold_478_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(962..1375)
DNA (414bp) protein (138aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Lysozyme n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHW7_9CLOT
Phage-related lysozyme (muraminidase)
L2_037_000M1_scaffold_478_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1794..2264)
DNA (471bp) protein (157aa)
Toxin secretion/phage lysis holin n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN61_9CLOT
Toxin secretion/phage lysis holin {ECO:0000313|EMBL:CCY41749.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
toxin secretion/phage lysis holin
L2_037_000M1_scaffold_478_5
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2367..2600
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZG06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62914.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Phage integrase family.
L2_037_000M1_scaffold_478_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2925..3542
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHX9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41763.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted integral membrane protein
L2_037_000M1_scaffold_478_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3761..4369
DNA (609bp) protein (203aa)
50S ribosomal protein L25 n=1 Tax=Clostridium sp. CAG:7 RepID=R5II61_9CLOT
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ribosomal protein L25, Ctc-form
L2_037_000M1_scaffold_478_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4437..5072)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41767.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_037_000M1_scaffold_478_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5166..5654)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41769.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_037_000M1_scaffold_478_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5758..6054)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5II66_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41770.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_037_000M1_scaffold_478_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6772..7473)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHY7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41773.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_037_000M1_scaffold_478_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7710..8954)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5II69_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41775.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_037_000M1_scaffold_478_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9061..10386)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41778.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_037_000M1_scaffold_478_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10534..11517)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IN95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41779.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted dehydrogenases and related proteins
L2_037_000M1_scaffold_478_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11527..12426)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYG7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41781.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
cell wall binding repeat-containing protein
L2_037_000M1_scaffold_478_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12697..13929
DNA (1233bp) protein (411aa)
Glutamate synthase (NADPH) small chain n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYH7_9CLOT
Glutamate synthase (NADPH) small chain {ECO:0000313|EMBL:CCY41782.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
oxidoreductase
L2_037_000M1_scaffold_478_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13982..14779
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41783.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted membrane protein
L2_037_000M1_scaffold_478_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14858..16198)
DNA (1341bp) protein (447aa)
Cytosine deaminase and related metal-dependent hydrolases n=1 Tax=Clostridium sp. CAG:7 RepID=R5INA0_9CLOT
Cytosine deaminase and related metal-dependent hydrolases {ECO:0000313|EMBL:CCY41784.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Cytosine deaminase and related metal-dependent hydrolases
L2_037_000M1_scaffold_478_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16201..17967)
DNA (1767bp) protein (589aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Clostridium sp. CAG:7 RepID=R5II79_9CLOT
L2_037_000M1_scaffold_478_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17978..19081)
DNA (1104bp) protein (368aa)
Spermidine/putrescine-binding periplasmic protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYH1_9CLOT
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:CCY41786.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Spermidine/putrescine-binding periplasmic protein
L2_037_000M1_scaffold_478_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19163..20203)
DNA (1041bp) protein (347aa)
ABC-type spermidine/putrescine transport systems ATPase components n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYI2_9CLOT
ABC-type spermidine/putrescine transport systems ATPase components {ECO:0000313|EMBL:CCY41787.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ABC-type spermidine/putrescine transport systems, ATPase components
L2_037_000M1_scaffold_478_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20253..21035)
DNA (783bp) protein (261aa)
ABC-type spermidine/putrescine transport system permease component II n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHZ9_9CLOT
ABC-type spermidine/putrescine transport system permease component II {ECO:0000313|EMBL:CCY41788.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ABC-type spermidine/putrescine transport system, permease component II
L2_037_000M1_scaffold_478_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21028..21861)
DNA (834bp) protein (278aa)
ABC-type spermidine/putrescine transport system permease component I n=1 Tax=Clostridium sp. CAG:7 RepID=R5INA6_9CLOT
ABC-type spermidine/putrescine transport system permease component I {ECO:0000313|EMBL:CCY41789.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ABC-type spermidine/putrescine transport system, permease component I
L2_037_000M1_scaffold_478_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22042..22986
DNA (945bp) protein (315aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:7 RepID=R5II82_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CCY41790.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Transcriptional regulator
L2_037_000M1_scaffold_478_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23014..24141)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYH5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41791.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted multitransmembrane protein
L2_037_000M1_scaffold_478_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24264..25823)
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IYI8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41792.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
putative surface layer protein
L2_037_000M1_scaffold_478_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26036..27520)
DNA (1485bp) protein (495aa)
dipeptidase A. Cysteine peptidase. MEROPS family C69 (EC:3.4.-.-)
Dipeptidase A. Cysteine peptidase. MEROPS family C69 n=1 Tax=Clostridium sp. CAG:7 RepID=R5II03_9CLOT
Dipeptidase A. Cysteine peptidase. MEROPS family C69 {ECO:0000313|EMBL:CCY41793.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_037_000M1_scaffold_478_28
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27499..27798)
DNA (300bp) protein (100aa)
MATE efflux family protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NM28_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCY98396.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
MATE efflux family protein
L2_037_000M1_scaffold_478_29
unknown

Not on your lists

comp(27963..28082)
DNA (120bp) protein (40aa)

This feature has no annotations

L2_037_000M1_scaffold_478_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28176..29282)
DNA (1107bp) protein (369aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41794.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Displaying items 1-30 of 44 in total

View Taxonomy