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L2_037_000M1_scaffold_515

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_515_1
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..260)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78483.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Global regulator protein family.
L2_037_000M1_scaffold_515_2
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

579..1007
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HWP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29182.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
XRE family transcriptional regulator
L2_037_000M1_scaffold_515_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1099..1290)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78485.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_037_000M1_scaffold_515_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1388..2110)
DNA (723bp) protein (241aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V4W7_9FIRM
L2_037_000M1_scaffold_515_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2238..3293)
DNA (1056bp) protein (352aa)
Putative methyl-accepting chemotaxis protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCJ0_9FIRM
Putative methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CCZ78487.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative methyl-accepting chemotaxis protein
L2_037_000M1_scaffold_515_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3465..3989)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78488.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
spore maturation protein B
L2_037_000M1_scaffold_515_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3986..4570)
DNA (585bp) protein (195aa)
Uncharacterized membrane protein required for spore maturation in B.subtilis n=1 Tax=Roseburia sp. CAG:18 RepID=R5URX8_9FIRM
Uncharacterized membrane protein required for spore maturation in B.subtilis {ECO:0000313|EMBL:CCZ78489.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Uncharacterized membrane protein, required for spore maturation in B.subtilis.
L2_037_000M1_scaffold_515_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4721..6466
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78490.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_037_000M1_scaffold_515_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6483..7337)
DNA (855bp) protein (285aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Roseburia sp. CAG:18 RepID=R5V4X2_9FIRM
conserved hypothetical protein TIGR00096
L2_037_000M1_scaffold_515_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7585..8937
DNA (1353bp) protein (451aa)
Putative efflux protein MATE family n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCJ7_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CCZ78492.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative efflux protein, MATE family
L2_037_000M1_scaffold_515_11
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8916..9719)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GSB8_SELRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL83655.1}; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
L2_037_000M1_scaffold_515_12
unknown

Not on your lists

comp(9752..10534)
DNA (783bp) protein (261aa)

This feature has no annotations

L2_037_000M1_scaffold_515_13
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10515..11231)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IXP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS26674.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L2_037_000M1_scaffold_515_14
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11451..11813)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78493.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_037_000M1_scaffold_515_15
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11797..12054)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WX83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77837.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L2_037_000M1_scaffold_515_16
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12104..13567)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MYI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS75858.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
membrane associated histidine kinase-like ATPase
L2_037_000M1_scaffold_515_17
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(13574..14302)
DNA (729bp) protein (243aa)
Uncharacterized protein n=2 Tax=root RepID=R6ESY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB00264.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
transcriptional regulator
L2_037_000M1_scaffold_515_18
unknown

Not on your lists

comp(14320..14778)
DNA (459bp) protein (153aa)

This feature has no annotations

L2_037_000M1_scaffold_515_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14927..17554)
DNA (2628bp) protein (876aa)
Excinuclease ATPase subunit n=1 Tax=Roseburia sp. CAG:18 RepID=R5URY5_9FIRM
Excinuclease ATPase subunit {ECO:0000313|EMBL:CCZ78494.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Excinuclease ATPase subunit
L2_037_000M1_scaffold_515_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17616..19235)
DNA (1620bp) protein (540aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKF7_9FIRM
L2_037_000M1_scaffold_515_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19294..19551)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V4Z7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78496.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Phosphotransferase System HPr (HPr) Family
L2_037_000M1_scaffold_515_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19617..21650)
DNA (2034bp) protein (678aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78497.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4)
L2_037_000M1_scaffold_515_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21663..22577)
DNA (915bp) protein (305aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
fructose-1-phosphate kinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJS5_9FIRM
L2_037_000M1_scaffold_515_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22574..23323)
DNA (750bp) protein (250aa)
Transcriptional regulators of sugar metabolism n=1 Tax=Roseburia sp. CAG:18 RepID=R5US09_9FIRM
Transcriptional regulators of sugar metabolism {ECO:0000313|EMBL:CCZ78499.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Transcriptional regulators of sugar metabolism
L2_037_000M1_scaffold_515_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23975..25498
DNA (1524bp) protein (508aa)
Fe-hydrogenase large subunit family protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKI8_9FIRM
Fe-hydrogenase large subunit family protein {ECO:0000313|EMBL:CCZ78500.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Iron only hydrogenase large subunit, C-terminal domain
L2_037_000M1_scaffold_515_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25568..26326)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V509_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78501.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L2_037_000M1_scaffold_515_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26450..28456)
DNA (2007bp) protein (669aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VCN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78502.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats
L2_037_000M1_scaffold_515_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28461..28982)
DNA (522bp) protein (174aa)
Sigma-24 ECF subfamily n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJS9_9FIRM
Sigma-24 ECF subfamily {ECO:0000313|EMBL:CCZ78503.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
RNA polymerase sigma factor, sigma-70 family
L2_037_000M1_scaffold_515_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29059..31167)
DNA (2109bp) protein (703aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5US18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78504.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L2_037_000M1_scaffold_515_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31373..32440
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UKJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78505.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
Displaying items 1-30 of 37 in total

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