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L2_037_000M1_scaffold_527

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_527_1
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..115
DNA (114bp) protein (38aa)
UvrABC system protein B n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J7J5_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
excinuclease ABC, B subunit
L2_037_000M1_scaffold_527_2
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(449..736)
DNA (288bp) protein (96aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LP30_9FIRM
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:EFU76348.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
RelE family toxin-antitoxin system toxin protein
L2_037_000M1_scaffold_527_3
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(733..1008)
DNA (276bp) protein (92aa)
Addiction module antitoxin, RelB/DinJ family n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LP31_9FIRM
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:EFU76349.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein
L2_037_000M1_scaffold_527_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1135..1362
DNA (228bp) protein (76aa)
DNA primase {ECO:0000313|EMBL:CCK94211.1}; EC=2.7.7.- {ECO:0000313|EMBL:CCK94211.1};; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
DNA primase n=3 Tax=Clostridium difficile RepID=U3UC19_CLODI
DNA primase (bacterial type)
L2_037_000M1_scaffold_527_5
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1610..2767
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KSR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS49415.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
hypothetical protein
L2_037_000M1_scaffold_527_6
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2764..3303
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=root RepID=C0D264_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG54579.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_037_000M1_scaffold_527_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3466..4635
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CWN6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61814.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L2_037_000M1_scaffold_527_8
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5117..5710
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BBS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG82382.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L2_037_000M1_scaffold_527_9
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5707..6552
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NUH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC09871.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Domain of unknown function (DUF1814).
L2_037_000M1_scaffold_527_10
Oribacterium asaccharolyticum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6703..7095
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Oribacterium sp. ACB7 RepID=G9WS49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL14139.1}; TaxID=796944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium asaccharolyticum ACB7.;"
hypothetical protein
L2_037_000M1_scaffold_527_11
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7284..8582)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JV56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE67536.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
hypothetical protein
L2_037_000M1_scaffold_527_12
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8818..8949)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NMD1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC13353.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L2_037_000M1_scaffold_527_13
unknown

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9346..9504
DNA (159bp) protein (53aa)

This feature has no annotations

L2_037_000M1_scaffold_527_14
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9508..10572
DNA (1065bp) protein (355aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FIB7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03878.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
phage-type endonuclease
L2_037_000M1_scaffold_527_15
unknown

Not on your lists

10592..10783
DNA (192bp) protein (64aa)

This feature has no annotations

L2_037_000M1_scaffold_527_16
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10788..13049
DNA (2262bp) protein (754aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
RecD/TraA family helicase (EC:3.1.11.5)
Putative helicase, RecD/TraA family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P898_9FIRM
L2_037_000M1_scaffold_527_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13115..14155
DNA (1041bp) protein (347aa)
Uncharacterized protein n=2 Tax=Clostridium hathewayi RepID=D3ABS6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00749.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L2_037_000M1_scaffold_527_18
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14209..15816
DNA (1608bp) protein (536aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R7J1_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL03720.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_037_000M1_scaffold_527_19
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15906..16502
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98645.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_037_000M1_scaffold_527_20
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16499..18502
DNA (2004bp) protein (668aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IJZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22121.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L2_037_000M1_scaffold_527_21
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18587..19954
DNA (1368bp) protein (456aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AJA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87410.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L2_037_000M1_scaffold_527_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20092..21006
DNA (915bp) protein (305aa)
Uncharacterized protein n=2 Tax=Clostridium hathewayi RepID=D3ABQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61623.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L2_037_000M1_scaffold_527_23
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21012..21377
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FJY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY01012.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L2_037_000M1_scaffold_527_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21406..21738)
DNA (333bp) protein (111aa)
DNA-binding helix-turn-helix protein n=2 Tax=Clostridium hathewayi RepID=D3ABQ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61625.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
XRE family transcriptional regulator
L2_037_000M1_scaffold_527_25
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21883..22671
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0JI73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT27568.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
Two component transcriptional regulator, LytTR family
L2_037_000M1_scaffold_527_26
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22668..23951
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=S2LJB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPC05078.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L2_037_000M1_scaffold_527_27
unknown

Not on your lists

24186..24335
DNA (150bp) protein (50aa)

This feature has no annotations

L2_037_000M1_scaffold_527_28
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24336..24887
DNA (552bp) protein (184aa)
Accessory protein regulator protein B n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SH39_CLOSG
Accessory protein regulator protein B {ECO:0000313|EMBL:EDU38866.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 15579.;"
AIP processing-secretion protein
L2_037_000M1_scaffold_527_29
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25278..25685
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R5FBP6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY01009.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L2_037_000M1_scaffold_527_30
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25675..25857
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R5F857_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY01008.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
Displaying items 1-30 of 37 in total

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