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L2_037_000M1_scaffold_529

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_529_1
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..323)
DNA (321bp) protein (107aa)
Histidine kinase-DNA gyrase B-and HSP90-like ATPase./Histidine kinase./HAMP domain n=1 Tax=Roseburia sp. CAG:50 RepID=R5U4L3_9FIRM
Histidine kinase-DNA gyrase B-and HSP90-like ATPase./Histidine kinase./HAMP domain {ECO:0000313|EMBL:CCZ64022.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L2_037_000M1_scaffold_529_2
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(295..1827)
DNA (1533bp) protein (511aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Roseburia sp. CAG:50 RepID=R5TYM2_9FIRM
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:CCZ64021.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L2_037_000M1_scaffold_529_3
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1831..4089)
DNA (2259bp) protein (753aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PIU7_9FIRM
L2_037_000M1_scaffold_529_4
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4284..5150
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TL38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64019.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
AraC-type DNA-binding domain-containing proteins
L2_037_000M1_scaffold_529_5
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5190..5972)
DNA (783bp) protein (261aa)
Diguanylate cyclase domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PHP2_9FIRM
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERK43681.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
diguanylate cyclase (GGDEF) domain/uncharacterized domain HDIG
L2_037_000M1_scaffold_529_6
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6007..8022)
DNA (2016bp) protein (672aa)
Diguanylate cyclase (GGDEF) domain/uncharacterized domain HDIG n=1 Tax=Roseburia sp. CAG:50 RepID=R5TEF2_9FIRM
Diguanylate cyclase (GGDEF) domain/uncharacterized domain HDIG {ECO:0000313|EMBL:CCZ64018.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
diguanylate cyclase (GGDEF) domain/uncharacterized domain HDIG
L2_037_000M1_scaffold_529_7
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8144..9349)
DNA (1206bp) protein (402aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=2 Tax=Clostridiales RepID=U2QY61_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:ERK43682.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
23S rRNA (uracil-5-)-methyltransferase RumA
L2_037_000M1_scaffold_529_8
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9351..10055)
DNA (705bp) protein (235aa)
RelA/SpoT domain protein n=2 Tax=Clostridiales RepID=U2QQV1_9FIRM
GTP pyrophosphokinase {ECO:0000313|EMBL:CCZ64016.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L2_037_000M1_scaffold_529_9
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10303..10806)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TEH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64015.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Site-specific recombinase XerD
L2_037_000M1_scaffold_529_10
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10900..11070)
DNA (171bp) protein (57aa)
DNA binding domain, excisionase family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PCW3_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:ERK41951.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L2_037_000M1_scaffold_529_11
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11052..11321)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TEE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64013.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
Inhibitor of the KinA pathway to sporulation, predicted exonuclease
L2_037_000M1_scaffold_529_12
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11340..11840
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PHE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK43581.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L2_037_000M1_scaffold_529_13
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11938..12366)
DNA (429bp) protein (143aa)
4Fe-4S binding domain protein n=2 Tax=Clostridiales RepID=R5TYL4_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:ERK43582.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
4Fe-4S ferredoxin
L2_037_000M1_scaffold_529_14
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12363..14441)
DNA (2079bp) protein (693aa)
anaerobic dehydrogenase (EC:1.7.99.4)
Molybdopterin oxidoreductase n=1 Tax=Roseburia sp. CAG:50 RepID=R5TEG9_9FIRM
Molybdopterin oxidoreductase {ECO:0000313|EMBL:CCZ64010.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L2_037_000M1_scaffold_529_15
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14597..15205)
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TL28_9FIRM
HDIG domain protein {ECO:0000313|EMBL:ERK43585.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
uncharacterized domain HDIG
L2_037_000M1_scaffold_529_16
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15642..16076)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QXX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK43587.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
DNA or RNA helicases of superfamily II
L2_037_000M1_scaffold_529_17
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16863..17030)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QQJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK43588.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L2_037_000M1_scaffold_529_18
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17072..18070)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PIL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK43589.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L2_037_000M1_scaffold_529_19
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18195..18383)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2NZL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK43590.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L2_037_000M1_scaffold_529_20
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18325..18558)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PHF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK43591.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L2_037_000M1_scaffold_529_21
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18572..18673)
DNA (102bp) protein (34aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5THT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD25497.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L2_037_000M1_scaffold_529_22
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18848..19000)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QXY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK43592.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
CobQ/CobB/MinD/ParA nucleotide binding domain.
L2_037_000M1_scaffold_529_23
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19381..20595)
DNA (1215bp) protein (405aa)
SAM-dependent methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5U2A6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65261.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L2_037_000M1_scaffold_529_24
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20776..21720)
DNA (945bp) protein (315aa)
NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding (EC:3.6.1.22)
NTP pyrophosphohydrolases containing a Zn-finger n=1 Tax=Roseburia sp. CAG:50 RepID=R5THW0_9FIRM
NTP pyrophosphohydrolases containing a Zn-finger {ECO:0000313|EMBL:CCZ65260.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L2_037_000M1_scaffold_529_25
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21786..22274)
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TPG4_9FIRM
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:ERK45986.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
cytidine/deoxycytidylate deaminase family protein
L2_037_000M1_scaffold_529_26
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22383..23930)
DNA (1548bp) protein (516aa)
Sulfite reductase, beta subunit (hemoprotein) (EC:1.7.7.1)
Nitrite/sulfite reductase ferredoxin domain protein n=2 Tax=Clostridiales RepID=U2P688_9FIRM
Nitrite/sulfite reductase ferredoxin domain protein {ECO:0000313|EMBL:ERK45985.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L2_037_000M1_scaffold_529_27
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23935..24468)
DNA (534bp) protein (178aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2PQF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK45984.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L2_037_000M1_scaffold_529_28
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24654..26261)
DNA (1608bp) protein (536aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WW86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX68360.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_037_000M1_scaffold_529_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26263..27123)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JFP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76232.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L2_037_000M1_scaffold_529_30
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27174..27359)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BEH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG88255.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
Displaying items 1-30 of 46 in total

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