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L2_037_000M1_scaffold_665

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_665_1
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1285)
DNA (1284bp) protein (428aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
glycyl-tRNA synthetase, dimeric type (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Clostridium sp. CAG:43 RepID=R7ARR9_9CLOT
L2_037_000M1_scaffold_665_2
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1381..2040)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AKY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD56189.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L2_037_000M1_scaffold_665_3
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2196..3221)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B072_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD56187.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L2_037_000M1_scaffold_665_4
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3252..3899)
DNA (648bp) protein (216aa)
DNA repair protein RecO n=1 Tax=Clostridium sp. CAG:43 RepID=R7ACX4_9CLOT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
DNA repair protein RecO
L2_037_000M1_scaffold_665_5
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3920..4837)
DNA (918bp) protein (306aa)
GTPase Era n=1 Tax=Clostridium sp. CAG:43 RepID=R7AKY0_9CLOT
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
GTP-binding protein Era
L2_037_000M1_scaffold_665_6
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4864..7782)
DNA (2919bp) protein (973aa)
M16 family Peptidase n=1 Tax=Clostridium sp. CAG:43 RepID=R7B1Y9_9CLOT
M16 family Peptidase {ECO:0000313|EMBL:CDD56182.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Predicted Zn-dependent peptidases, insulinase-like
L2_037_000M1_scaffold_665_7
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7860..8672)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7ACX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD56180.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L2_037_000M1_scaffold_665_8
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8707..9945)
DNA (1239bp) protein (413aa)
Collagenase and related proteases (EC:3.4.-.-)
U32 family Peptidase n=1 Tax=Clostridium sp. CAG:43 RepID=R7AKX4_9CLOT
U32 family Peptidase {ECO:0000313|EMBL:CDD56179.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L2_037_000M1_scaffold_665_9
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9960..10643)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A5U8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD56178.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Predicted O-methyltransferase
L2_037_000M1_scaffold_665_10
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10588..11001)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B0U6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD56177.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Predicted periplasmic solute-binding protein
L2_037_000M1_scaffold_665_11
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11032..12699)
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AZZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD56172.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
RNA-metabolising metallo-beta-lactamase
L2_037_000M1_scaffold_665_12
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12734..13036)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7ARQ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD56171.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Protein of unknown function (DUF1292).
L2_037_000M1_scaffold_665_13
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13093..13530)
DNA (438bp) protein (146aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Putative Holliday junction resolvase n=3 Tax=Clostridium RepID=E7GJ13_CLOSY
conserved hypothetical protein TIGR00250
L2_037_000M1_scaffold_665_14
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13638..13901)
DNA (264bp) protein (88aa)
UPF0297 protein BN653_01328 n=1 Tax=Clostridium sp. CAG:43 RepID=R7ACW0_9CLOT
UPF0297 protein BN653_01328 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L2_037_000M1_scaffold_665_15
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14012..15181)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AKW6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD56169.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
L2_037_000M1_scaffold_665_16
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15463..16398)
DNA (936bp) protein (312aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
cysteine synthase A (EC:2.5.1.47)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A5T8_9CLOT
L2_037_000M1_scaffold_665_17
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17290..17919
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A5T4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD56163.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L2_037_000M1_scaffold_665_18
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18031..18789
DNA (759bp) protein (253aa)
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 n=1 Tax=Clostridium sp. CAG:43 RepID=R7ARP9_9CLOT
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 {ECO:0000313|EMBL:CDD56161.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L2_037_000M1_scaffold_665_19
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18914..20230)
DNA (1317bp) protein (439aa)
MiaB-like tRNA modifying enzyme (EC:1.3.1.74)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AKV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD56159.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L2_037_000M1_scaffold_665_20
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20322..20552
DNA (231bp) protein (77aa)
PTS HPr component phosphorylation site n=1 Tax=Clostridium sp. CAG:43 RepID=R7A5S9_9CLOT
PTS HPr component phosphorylation site {ECO:0000313|EMBL:CDD56158.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
PTS HPr component phosphorylation site.
L2_037_000M1_scaffold_665_21
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20765..21943)
DNA (1179bp) protein (393aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Probable tRNA sulfurtransferase n=1 Tax=Clostridium sp. CAG:43 RepID=R7ARP5_9CLOT
thiazole biosynthesis/tRNA modification protein ThiI
L2_037_000M1_scaffold_665_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22024..23178)
DNA (1155bp) protein (385aa)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (EC:2.8.1.7)
Aminotransferase, class V n=3 Tax=Clostridium RepID=E9SNF0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07298.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L2_037_000M1_scaffold_665_23
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23210..23944)
DNA (735bp) protein (245aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium sp. CAG:43 RepID=R7AZZ1_9CLOT
L2_037_000M1_scaffold_665_24
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23947..24903)
DNA (957bp) protein (319aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
[LSU ribosomal protein L11P]-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Clostridium sp. CAG:43 RepID=R7ACT9_9CLOT
L2_037_000M1_scaffold_665_25
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25150..25911)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AZS0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD56142.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Predicted permeases
L2_037_000M1_scaffold_665_26
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26004..27260)
DNA (1257bp) protein (419aa)
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EFE13763.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EFE13763.1};; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Clostridium sp. M62/1 RepID=D4C9A9_9CLOT
L2_037_000M1_scaffold_665_27
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27260..29074)
DNA (1815bp) protein (605aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Elongation factor 4 n=1 Tax=Clostridium sp. CAG:43 RepID=R7ARM5_9CLOT
GTP-binding protein LepA
L2_037_000M1_scaffold_665_28
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29240..30466)
DNA (1227bp) protein (409aa)
Stage II sporulation protein P n=1 Tax=Clostridium sp. CAG:149 RepID=R5LSA6_9CLOT
stage II sporulation protein P
Stage II sporulation protein P {ECO:0000313|EMBL:EFE13765.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_037_000M1_scaffold_665_29
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30554..31555)
DNA (1002bp) protein (334aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
GPR endopeptidase (EC:3.4.24.78)
Germination protease n=1 Tax=Clostridium sp. CAG:43 RepID=R7ANG7_9CLOT
L2_037_000M1_scaffold_665_30
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31757..32395)
DNA (639bp) protein (213aa)
Probable GTP-binding protein EngB n=1 Tax=Clostridium sp. CAG:43 RepID=R7B053_9CLOT
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
ribosome biogenesis GTP-binding protein YsxC
Displaying items 1-30 of 55 in total

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