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L2_037_000M1_scaffold_739

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_739_1
unknown

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2..244
DNA (243bp) protein (81aa)

This feature has no annotations

L2_037_000M1_scaffold_739_2
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(198..1076)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LD64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85453.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L2_037_000M1_scaffold_739_3
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1296..2582
DNA (1287bp) protein (429aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Coprococcus comes CAG:19 RepID=R6LPJ9_9FIRM
L2_037_000M1_scaffold_739_4
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2616..3464
DNA (849bp) protein (283aa)
Thymidylate synthase n=2 Tax=Coprococcus RepID=C0B956_9FIRM
Thymidylate synthase {ECO:0000313|EMBL:CDB85455.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
ThyA; thymidylate synthase
L2_037_000M1_scaffold_739_5
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3482..3970
DNA (489bp) protein (163aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=2 Tax=Coprococcus RepID=C0B955_9FIRM
L2_037_000M1_scaffold_739_6
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4398..6128
DNA (1731bp) protein (577aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase n=2 Tax=Coprococcus RepID=C0B953_9FIRM
L2_037_000M1_scaffold_739_7
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6147..6656
DNA (510bp) protein (170aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase small subunit n=1 Tax=Coprococcus comes CAG:19 RepID=R6LD70_9FIRM
Acetolactate synthase small subunit {ECO:0000313|EMBL:CDB85458.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L2_037_000M1_scaffold_739_8
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6811..7836
DNA (1026bp) protein (342aa)
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:EEG89803.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EEG89803.1};; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
branched-chain amino acid aminotransferase, group II (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=2 Tax=Coprococcus RepID=C0B951_9FIRM
L2_037_000M1_scaffold_739_9
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7836..8471
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LHY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85460.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Uncharacterised ACR, YkgG family COG1556.
L2_037_000M1_scaffold_739_10
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8737..9495
DNA (759bp) protein (253aa)
Methyltransferase domain protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LTM4_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:CDB85461.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L2_037_000M1_scaffold_739_11
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9515..10393
DNA (879bp) protein (293aa)
33 kDa chaperonin n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B947_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Disulfide bond chaperones of the HSP33 family
L2_037_000M1_scaffold_739_12
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10406..12322
DNA (1917bp) protein (639aa)
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthase n=1 Tax=Coprococcus comes CAG:19 RepID=R6LD76_9FIRM
NAD+ synthase {ECO:0000313|EMBL:CDB85463.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L2_037_000M1_scaffold_739_13
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12434..13120)
DNA (687bp) protein (229aa)
S1 RNA binding domain protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LPL2_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:CDB85464.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Ribosomal protein S1
L2_037_000M1_scaffold_739_14
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13827..15479
DNA (1653bp) protein (551aa)
Inorganic pyrophosphatase/exopolyphosphatase (EC:3.6.1.1)
Putative manganese-dependent inorganic pyrophosphatase n=1 Tax=Coprococcus comes CAG:19 RepID=R6LI01_9FIRM
Putative manganese-dependent inorganic pyrophosphatase {ECO:0000313|EMBL:CDB85470.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L2_037_000M1_scaffold_739_15
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15510..16103
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LTN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85471.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
L2_037_000M1_scaffold_739_16
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16402..17550
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LRL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86269.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
iron-containing alcohol dehydrogenase
L2_037_000M1_scaffold_739_17
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17752..18471
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LFH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86268.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Predicted xylanase/chitin deacetylase
L2_037_000M1_scaffold_739_18
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18485..19804
DNA (1320bp) protein (440aa)
ATPase, AAA family n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B934_9FIRM
ATPase, AAA family {ECO:0000313|EMBL:EEG89786.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
ATPase related to the helicase subunit of the Holliday junction resolvase
L2_037_000M1_scaffold_739_19
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19901..20359
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6LVS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86266.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L2_037_000M1_scaffold_739_20
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20363..21289
DNA (927bp) protein (309aa)
SPFH/Band 7/PHB domain protein n=2 Tax=Coprococcus RepID=R6LK43_9FIRM
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:CDB86265.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Membrane protease subunits, stomatin/prohibitin homologs
L2_037_000M1_scaffold_739_21
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21322..22044
DNA (723bp) protein (241aa)
Response regulator receiver domain protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B929_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEG89781.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
LytTR family two component transcriptional regulator
L2_037_000M1_scaffold_739_22
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22037..22888
DNA (852bp) protein (284aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Coprococcus RepID=C0B928_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDB86263.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
signal transduction histidine kinase regulating citrate/malate metabolism
L2_037_000M1_scaffold_739_23
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23254..23766)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B926_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG89778.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L2_037_000M1_scaffold_739_24
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23779..24780)
DNA (1002bp) protein (334aa)
Radical SAM protein, TIGR01212 family n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B925_9FIRM
Radical SAM protein, TIGR01212 family {ECO:0000313|EMBL:EEG89777.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
radical SAM protein, TIGR01212 family
L2_037_000M1_scaffold_739_25
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24785..25933)
DNA (1149bp) protein (383aa)
Malic enzyme (EC:1.1.1.38)
Malic enzyme, NAD binding domain protein n=2 Tax=Coprococcus RepID=C0B924_9FIRM
Malic enzyme NAD binding domain protein {ECO:0000313|EMBL:CDB86261.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L2_037_000M1_scaffold_739_26
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26155..27480
DNA (1326bp) protein (442aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Transcription termination factor Rho n=2 Tax=Coprococcus RepID=C0B922_9FIRM
transcription termination factor Rho
L2_037_000M1_scaffold_739_27
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27589..27789
DNA (201bp) protein (67aa)
50S ribosomal protein L31 n=2 Tax=Coprococcus RepID=C0B921_9FIRM
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
LSU ribosomal protein L31P
L2_037_000M1_scaffold_739_28
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27870..28805
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B920_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG89772.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Predicted metal-dependent enzyme
L2_037_000M1_scaffold_739_29
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28811..29668
DNA (858bp) protein (286aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Release factor glutamine methyltransferase n=1 Tax=Coprococcus comes CAG:19 RepID=R6MK71_9FIRM
protein-(glutamine-N5) methyltransferase, release factor-specific
L2_037_000M1_scaffold_739_30
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29683..30759
DNA (1077bp) protein (359aa)
Peptide chain release factor 1 n=2 Tax=Coprococcus RepID=C0B917_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
bacterial peptide chain release factor 1 (bRF-1)
Displaying items 1-30 of 46 in total

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