ggKbase home page

L2_037_000M1_scaffold_780

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_780_1
unknown

Not on your lists

3..71
DNA (69bp) protein (23aa)

This feature has no annotations

L2_037_000M1_scaffold_780_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

68..592
DNA (525bp) protein (175aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQ17_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
L2_037_000M1_scaffold_780_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

642..899
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J055_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42352.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_037_000M1_scaffold_780_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

896..1543
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J018_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42351.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Stage V sporulation protein AA.
L2_037_000M1_scaffold_780_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1533..1976
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42350.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_037_000M1_scaffold_780_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2019..2465
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJL6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42348.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
SpoVA protein.
L2_037_000M1_scaffold_780_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2554..5211
DNA (2658bp) protein (886aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
helicase, putative, RecD/TraA family (EC:3.1.11.5)
Helicase putative RecD/TraA family n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJL1_9CLOT
L2_037_000M1_scaffold_780_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5415..7667
DNA (2253bp) protein (751aa)
formate acetyltransferase 1 (EC:2.3.1.54)
Formate acetyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJR4_9CLOT
Formate acetyltransferase {ECO:0000313|EMBL:CCY42335.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_037_000M1_scaffold_780_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7821..8567
DNA (747bp) protein (249aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
pyruvate formate-lyase 1-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPZ2_9CLOT
L2_037_000M1_scaffold_780_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8811..9905
DNA (1095bp) protein (365aa)
Glycerol dehydrogenase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJK1_9CLOT
Glycerol dehydrogenase {ECO:0000313|EMBL:CCY42333.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
iron-containing alcohol dehydrogenase
L2_037_000M1_scaffold_780_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9914..10780)
DNA (867bp) protein (289aa)
Predicted transcriptional regulator LysR family n=1 Tax=Clostridium sp. CAG:7 RepID=R5J037_9CLOT
Predicted transcriptional regulator LysR family {ECO:0000313|EMBL:CCY42332.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
LysR family transcriptional regulator
L2_037_000M1_scaffold_780_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10946..12070
DNA (1125bp) protein (375aa)
3-methylitaconate isomerase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZZ5_9CLOT
3-methylitaconate isomerase {ECO:0000313|EMBL:CCY42331.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
3-methylitaconate isomerase
L2_037_000M1_scaffold_780_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12136..13389
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42330.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
dicarboxylate carrier protein
L2_037_000M1_scaffold_780_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13421..14476
DNA (1056bp) protein (352aa)
pgl; 6-phosphogluconolactonase (EC:3.1.1.31)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJJ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42328.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_037_000M1_scaffold_780_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14549..16819
DNA (2271bp) protein (757aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J031_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42327.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_037_000M1_scaffold_780_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16885..18294
DNA (1410bp) protein (470aa)
MmgE/PrpD family protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPX7_9CLOT
MmgE/PrpD family protein {ECO:0000313|EMBL:CCY42324.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
MmgE/PrpD family protein
L2_037_000M1_scaffold_780_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18475..20790
DNA (2316bp) protein (772aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZY3_9CLOT
primosomal protein N'
L2_037_000M1_scaffold_780_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20817..21308
DNA (492bp) protein (164aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPW9_9CLOT
L2_037_000M1_scaffold_780_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21340..22284
DNA (945bp) protein (315aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZX6_9CLOT
L2_037_000M1_scaffold_780_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22342..23049
DNA (708bp) protein (236aa)
Neutral zinc metallopeptidase family protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPW3_9CLOT
Neutral zinc metallopeptidase family protein {ECO:0000313|EMBL:CCY42314.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted Zn-dependent protease
L2_037_000M1_scaffold_780_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23065..24450
DNA (1386bp) protein (462aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJI3_9CLOT
sun protein
L2_037_000M1_scaffold_780_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24466..25530
DNA (1065bp) protein (355aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Clostridium sp. CAG:7 RepID=R5J015_9CLOT
L2_037_000M1_scaffold_780_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25532..26278
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42311.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
protein serine/threonine phosphatase
L2_037_000M1_scaffold_780_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26272..28488
DNA (2217bp) protein (739aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJP1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42310.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
serine/threonine protein kinase with PASTA sensor(s)
L2_037_000M1_scaffold_780_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28679..29557
DNA (879bp) protein (293aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJH3_9CLOT
ribosome small subunit-dependent GTPase A
L2_037_000M1_scaffold_780_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29560..30225
DNA (666bp) protein (222aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J007_9CLOT
L2_037_000M1_scaffold_780_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30222..30872
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZV9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42301.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
thiamine pyrophosphokinase
L2_037_000M1_scaffold_780_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31007..31624
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJN2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42300.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_037_000M1_scaffold_780_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31670..32515
DNA (846bp) protein (282aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPU4_9CLOT
Phosphomethylpyrimidine kinase type-1
L2_037_000M1_scaffold_780_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32661..33956
DNA (1296bp) protein (432aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Seryl-tRNA synthetase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJG8_9CLOT
Seryl-tRNA synthetase {ECO:0000313|EMBL:CCY42298.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Displaying items 1-30 of 51 in total

View Taxonomy