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L2_037_000M1_scaffold_2024

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_2024_1
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(181..903)
DNA (723bp) protein (241aa)
ABC transporter ATP-binding protein n=2 Tax=Clostridiales RepID=R7GSG6_9FIRM
Arginine ABC transporter, ATP-binding protein ArtM {ECO:0000313|EMBL:ERI97420.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Amino acid transport ATP-binding protein
L2_037_000M1_scaffold_2024_2
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(896..2398)
DNA (1503bp) protein (501aa)
ABC-type amino acid transport/signal transduction systems periplasmic component/domain n=2 Tax=Clostridiales RepID=R7GSD8_9FIRM
ABC-type amino acid transport/signal transduction systems periplasmic component/domain {ECO:0000313|EMBL:CDE30025.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
L2_037_000M1_scaffold_2024_3
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2414..3292)
DNA (879bp) protein (293aa)
Sugar kinases ribokinase family n=2 Tax=Clostridiales RepID=R7GTE0_9FIRM
Sugar kinases ribokinase family {ECO:0000313|EMBL:CDE30023.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Sugar kinases, ribokinase family
L2_037_000M1_scaffold_2024_4
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3309..4328)
DNA (1020bp) protein (340aa)
SIS domain protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2EWG6_9FIRM
SIS domain protein {ECO:0000313|EMBL:ERI97416.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Predicted phosphosugar isomerases
L2_037_000M1_scaffold_2024_5
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4467..5291
DNA (825bp) protein (275aa)
UbiC transcription regulator-associated domain protein n=2 Tax=Clostridiales RepID=U2DKU5_9FIRM
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:ERI97415.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Transcriptional regulators
L2_037_000M1_scaffold_2024_6
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5437..6375)
DNA (939bp) protein (313aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GVR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE30017.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L2_037_000M1_scaffold_2024_7
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6685..7380)
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=3 Tax=Clostridiales RepID=D4LI02_9FIRM
ribosomal protein L1, bacterial/chloroplast
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L2_037_000M1_scaffold_2024_8
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7476..7901)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=4 Tax=Clostridiales RepID=D4LI01_9FIRM
LSU ribosomal protein L11P
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L2_037_000M1_scaffold_2024_9
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7970..8491)
DNA (522bp) protein (174aa)
Transcription termination/antitermination protein NusG n=4 Tax=Clostridiales RepID=D4LI00_9FIRM
transcription antitermination protein nusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_037_000M1_scaffold_2024_10
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8507..8713)
DNA (207bp) protein (69aa)
Protein translocase subunit secE/sec61 gamma n=2 Tax=Clostridiales RepID=R7GSB6_9FIRM
Protein translocase subunit secE/sec61 gamma {ECO:0000313|EMBL:CDE30005.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
protein translocase subunit secE/sec61 gamma
L2_037_000M1_scaffold_2024_11
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8739..8918)
DNA (180bp) protein (60aa)
50S ribosomal protein L33 n=1 Tax=Blautia sp. CAG:257 RepID=R5XKV1_9FIRM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
LSU ribosomal protein L33P
L2_037_000M1_scaffold_2024_12
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9041..9823)
DNA (783bp) protein (261aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CBL19458.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CBL19458.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LHZ7_9FIRM
L2_037_000M1_scaffold_2024_13
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9825..11642)
DNA (1818bp) protein (606aa)
Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] (EC:2.2.1.6)
Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (Cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] {ECO:0000313|EMBL:CBL19457.1}; EC=2.2.1.6 {ECO:0000313|EMBL:CBL19457.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (Cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LHZ6_9FIRM
L2_037_000M1_scaffold_2024_14
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11635..12789)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2DKT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI97405.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L2_037_000M1_scaffold_2024_15
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12821..15100)
DNA (2280bp) protein (760aa)
LPS biosynthesis protein n=2 Tax=Ruminococcus RepID=D4LHZ5_9FIRM
LPS biosynthesis protein
LPS biosynthesis protein {ECO:0000313|EMBL:CDE29986.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L2_037_000M1_scaffold_2024_16
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15104..16405)
DNA (1302bp) protein (434aa)
Cytidyltransferase-related domain n=3 Tax=Clostridiales RepID=D4LHZ4_9FIRM
cytidyltransferase-related domain
Cytidyltransferase-related domain {ECO:0000313|EMBL:CBL19455.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L2_037_000M1_scaffold_2024_17
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16413..17777)
DNA (1365bp) protein (455aa)
Fucose 4-O-acetylase and related acetyltransferases n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GT99_9FIRM
Fucose 4-O-acetylase and related acetyltransferases {ECO:0000313|EMBL:CDE29983.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Fucose 4-O-acetylase and related acetyltransferases
L2_037_000M1_scaffold_2024_18
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17892..18704)
DNA (813bp) protein (271aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2EWF1_9FIRM
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:ERI97401.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Glycosyltransferases involved in cell wall biogenesis
L2_037_000M1_scaffold_2024_19
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18718..20094)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GS89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE29980.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
L2_037_000M1_scaffold_2024_20
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20307..21707)
DNA (1401bp) protein (467aa)
ABC transporter, solute-binding protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2D3M2_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERI97399.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_037_000M1_scaffold_2024_21
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21812..22729)
DNA (918bp) protein (306aa)
Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-) n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GSC3_9FIRM
Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDE29976.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_037_000M1_scaffold_2024_22
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22729..23367)
DNA (639bp) protein (213aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=3 Tax=Clostridiales RepID=D4LHY9_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDE29974.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L2_037_000M1_scaffold_2024_23
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23554..24690)
DNA (1137bp) protein (379aa)
Carbohydrate ABC transporter ATP-binding protein CUT1 family (TC 3.A.1.1.-) n=2 Tax=Clostridiales RepID=R7GVL5_9FIRM
Carbohydrate ABC transporter ATP-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDE29972.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
Displaying 23 items

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