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L2_037_000M1_scaffold_35

Search features with annotation key words

Displaying items 1-30 of 149 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_35_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1802)
DNA (1800bp) protein (600aa)
Putative uncharacterized protein n=2 Tax=root RepID=D4JZZ1_9FIRM
Domain of unknown function DUF87.
Uncharacterized protein {ECO:0000313|EMBL:CBK99590.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_037_000M1_scaffold_35_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1777..2139)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJ36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ06811.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_037_000M1_scaffold_35_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2152..3018)
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAT6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01949.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_037_000M1_scaffold_35_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3232..3447)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZMR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44649.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_35_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3583..5349)
DNA (1767bp) protein (589aa)
TraG/TraD family protein n=2 Tax=Faecalibacterium prausnitzii RepID=E2ZM55_9FIRM
TraG/TraD family protein {ECO:0000313|EMBL:EFQ05750.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Type IV secretory pathway, VirD4 components
L2_037_000M1_scaffold_35_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5346..5804)
DNA (459bp) protein (153aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SCK6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01164.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_037_000M1_scaffold_35_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5834..6280)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP20666.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L2_037_000M1_scaffold_35_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6446..6685)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K4N3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98476.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_037_000M1_scaffold_35_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6696..7166)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZM59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05754.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_037_000M1_scaffold_35_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7233..8168)
DNA (936bp) protein (312aa)
ParB-like partition proteins n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8J7_9FIRM
ParB-like partition proteins
ParB-like partition proteins {ECO:0000313|EMBL:CBL01160.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_037_000M1_scaffold_35_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8125..8958)
DNA (834bp) protein (278aa)
ATPases involved in chromosome partitioning n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8J6_9FIRM
ATPases involved in chromosome partitioning
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CBL01159.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_037_000M1_scaffold_35_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8958..9827)
DNA (870bp) protein (290aa)
Replication initiator protein A (RepA) N-terminus n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8J5_9FIRM
Replication initiator protein A (RepA) N-terminus.
Replication initiator protein A (RepA) N-terminus {ECO:0000313|EMBL:CBL01158.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_037_000M1_scaffold_35_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9957..10172)
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZV5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99554.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_037_000M1_scaffold_35_14
unknown

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comp(10694..10951)
DNA (258bp) protein (86aa)

This feature has no annotations

L2_037_000M1_scaffold_35_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11078..14107
DNA (3030bp) protein (1010aa)
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Beta-galactosidase/beta-glucuronidase n=2 Tax=Faecalibacterium prausnitzii RepID=D4K1V3_9FIRM
L2_037_000M1_scaffold_35_16
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14233..15615)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QAW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC30214.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_037_000M1_scaffold_35_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15617..17092)
DNA (1476bp) protein (492aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4H2_9FIRM
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EEU97215.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
AAA domain (dynein-related subfamily).
L2_037_000M1_scaffold_35_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17083..18561)
DNA (1479bp) protein (493aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K1I9_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL00138.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_037_000M1_scaffold_35_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18768..20201)
DNA (1434bp) protein (478aa)
Citrate transporter n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4H0_9FIRM
Citrate transporter {ECO:0000313|EMBL:EEU97213.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
citrate transporter, CitMHS family
L2_037_000M1_scaffold_35_20
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20242..21456)
DNA (1215bp) protein (405aa)
Predicted acyl-CoA transferases/carnitine dehydratase n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q378_9FIRM
Predicted acyl-CoA transferases/carnitine dehydratase {ECO:0000313|EMBL:CDC30210.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Predicted acyl-CoA transferases/carnitine dehydratase
L2_037_000M1_scaffold_35_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21458..21787)
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=C7H4G8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL00141.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_037_000M1_scaffold_35_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21789..23159)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=C7H4G7_9FIRM
Protein of unknown function (DUF1446).
Uncharacterized protein {ECO:0000313|EMBL:CBL00142.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_037_000M1_scaffold_35_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23447..24487
DNA (1041bp) protein (347aa)
Transcriptional regulator, LacI family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4G5_9FIRM
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEU97208.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Transcriptional regulators
L2_037_000M1_scaffold_35_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24540..24935)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4G4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97207.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
uncharacterized domain 1
L2_037_000M1_scaffold_35_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25080..26768
DNA (1689bp) protein (563aa)
HAMP domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4G3_9FIRM
HAMP domain protein {ECO:0000313|EMBL:EEU97206.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted signal transduction protein with a C-terminal ATPase domain
L2_037_000M1_scaffold_35_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26765..28336
DNA (1572bp) protein (524aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4G2_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEU97205.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L2_037_000M1_scaffold_35_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28456..29712
DNA (1257bp) protein (419aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4G1_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEU97204.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_037_000M1_scaffold_35_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29969..31579
DNA (1611bp) protein (537aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4G0_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEU97203.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ABC-type dipeptide transport system, periplasmic component
L2_037_000M1_scaffold_35_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31706..32659
DNA (954bp) protein (318aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4F9_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEU97202.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L2_037_000M1_scaffold_35_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32675..33613
DNA (939bp) protein (313aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4F8_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEU97201.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
dipeptide/oligopeptide/nickel ABC transporter permease
Displaying items 1-30 of 149 in total

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