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L2_037_000M1_scaffold_291

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_291_1
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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115..1437
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZKP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA40233.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
putative efflux protein, MATE family
L2_037_000M1_scaffold_291_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1843..2328
DNA (486bp) protein (162aa)
Acetyltransferase, GNAT family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H904_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEU95541.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Acetyltransferase (GNAT) family.
L2_037_000M1_scaffold_291_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2410..3342)
DNA (933bp) protein (311aa)
ATPase components of various ABC-type transport systems, contain duplicated ATPase n=2 Tax=Faecalibacterium prausnitzii RepID=D4K946_9FIRM
ATPase components of various ABC-type transport systems, contain duplicated ATPase
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDP23062.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_037_000M1_scaffold_291_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3343..4440)
DNA (1098bp) protein (366aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K945_9FIRM
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain {ECO:0000313|EMBL:CBL01358.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_037_000M1_scaffold_291_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4454..5557)
DNA (1104bp) protein (368aa)
ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S688_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EDP23060.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L2_037_000M1_scaffold_291_6
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5559..6494)
DNA (936bp) protein (312aa)
ABC transporter permease protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q390_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDC31158.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L2_037_000M1_scaffold_291_7
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6628..8121)
DNA (1494bp) protein (498aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QDP9_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDC31159.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ABC-type oligopeptide transport system, periplasmic component
L2_037_000M1_scaffold_291_8
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8122..8334)
DNA (213bp) protein (71aa)
Tat pathway signal sequence domain protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QDP9_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDC31159.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ABC-type oligopeptide transport system, periplasmic component
L2_037_000M1_scaffold_291_9
unknown

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comp(8657..8842)
DNA (186bp) protein (62aa)

This feature has no annotations

L2_037_000M1_scaffold_291_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8867..10438)
DNA (1572bp) protein (524aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Ribonuclease Y n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H905_9FIRM
conserved hypothetical protein YmdA/YtgF
L2_037_000M1_scaffold_291_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10770..12530)
DNA (1761bp) protein (587aa)
LysR substrate binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H907_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EEU95544.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Transcriptional regulator
L2_037_000M1_scaffold_291_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12723..13091
DNA (369bp) protein (123aa)
Putative endoribonuclease L-PSP n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H908_9FIRM
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EEU95545.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
endoribonuclease L-PSP
L2_037_000M1_scaffold_291_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13229..14242
DNA (1014bp) protein (338aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
aspartate-ammonia ligase (EC:6.3.1.1)
Aspartate--ammonia ligase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H909_9FIRM
L2_037_000M1_scaffold_291_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14297..14959)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H910_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95547.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_037_000M1_scaffold_291_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14956..15546)
DNA (591bp) protein (197aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EEU95548.1}; EC=2.7.8.5 {ECO:0000313|EMBL:EEU95548.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H911_9FIRM
L2_037_000M1_scaffold_291_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15565..16890)
DNA (1326bp) protein (442aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
SSU ribosomal protein S12P methylthiotransferase (EC:2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H912_9FIRM
L2_037_000M1_scaffold_291_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17082..17594)
DNA (513bp) protein (171aa)
Regulatory protein RecX n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H913_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_037_000M1_scaffold_291_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17595..18776)
DNA (1182bp) protein (394aa)
Protein RecA n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H914_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
RecA protein
L2_037_000M1_scaffold_291_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18903..19754)
DNA (852bp) protein (284aa)
Protein-(Glutamine-N5) methyltransferase, release factor-specific {ECO:0000313|EMBL:EEU95552.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEU95552.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H915_9FIRM
protein-(glutamine-N5) methyltransferase, release factor-specific
L2_037_000M1_scaffold_291_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19748..20695)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H916_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95553.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted metal-dependent enzyme
L2_037_000M1_scaffold_291_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20777..22198)
DNA (1422bp) protein (474aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H917_9FIRM
Signal transduction histidine kinase
L2_037_000M1_scaffold_291_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22280..22984)
DNA (705bp) protein (235aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H918_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEU95555.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_037_000M1_scaffold_291_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23101..24405)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H919_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95556.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_037_000M1_scaffold_291_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24705..25046)
DNA (342bp) protein (114aa)
50S ribosomal protein L17 n=2 Tax=Faecalibacterium prausnitzii RepID=D4JY86_9FIRM
LSU ribosomal protein L17P
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_037_000M1_scaffold_291_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25072..26028)
DNA (957bp) protein (319aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H921_9FIRM
L2_037_000M1_scaffold_291_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26139..26741)
DNA (603bp) protein (201aa)
30S ribosomal protein S4 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H922_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
SSU ribosomal protein S4P
L2_037_000M1_scaffold_291_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26762..27172)
DNA (411bp) protein (137aa)
30S ribosomal protein S11 n=3 Tax=Faecalibacterium prausnitzii RepID=D4JY83_9FIRM
SSU ribosomal protein S11P
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L2_037_000M1_scaffold_291_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27187..27558)
DNA (372bp) protein (124aa)
30S ribosomal protein S13 n=2 Tax=Faecalibacterium prausnitzii RepID=C7H924_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
SSU ribosomal protein S13P
L2_037_000M1_scaffold_291_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27640..27753)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=5 Tax=Faecalibacterium prausnitzii RepID=D4JY81_9FIRM
LSU ribosomal protein L36P
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L2_037_000M1_scaffold_291_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27789..28193)
DNA (405bp) protein (135aa)
Translation initiation factor IF-1 n=2 Tax=root RepID=C7H926_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
translation initiation factor IF-1
Displaying items 1-30 of 72 in total

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