ggKbase home page

L2_037_000M1_scaffold_1286

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_1286_1
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

254..940
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z8F7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44598.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_037_000M1_scaffold_1286_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(921..2600)
DNA (1680bp) protein (560aa)
DNA repair protein RecN n=1 Tax=Clostridium sp. CAG:299 RepID=R7APW0_9CLOT
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
DNA replication and repair protein RecN
L2_037_000M1_scaffold_1286_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2645..3097)
DNA (453bp) protein (151aa)
Arginine repressor n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZU49_9CLOT
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
transcriptional regulator, ArgR family
L2_037_000M1_scaffold_1286_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3126..3992)
DNA (867bp) protein (289aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted sugar kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZEN6_9CLOT
L2_037_000M1_scaffold_1286_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4053..4859)
DNA (807bp) protein (269aa)
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZML0_9CLOT
Ribosomal RNA large subunit methyltransferase J {ECO:0000313|EMBL:CDD44594.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hemolysin TlyA family protein
L2_037_000M1_scaffold_1286_6
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4871..6730)
DNA (1860bp) protein (620aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z8F2_9CLOT
deoxyxylulose-5-phosphate synthase
L2_037_000M1_scaffold_1286_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6750..7637)
DNA (888bp) protein (296aa)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Geranylgeranyl pyrophosphate synthase n=1 Tax=Clostridium sp. CAG:299 RepID=R7APV6_9CLOT
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:CDD44592.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_037_000M1_scaffold_1286_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7627..7872)
DNA (246bp) protein (82aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZU44_9CLOT
Exonuclease VII small subunit.
L2_037_000M1_scaffold_1286_9
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7891..9114)
DNA (1224bp) protein (408aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Clostridium sp. M62/1 RepID=D4CDP8_9CLOT
exodeoxyribonuclease VII large subunit
L2_037_000M1_scaffold_1286_10
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9128..9571)
DNA (444bp) protein (148aa)
N utilization substance protein B homolog n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZMG3_9CLOT
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
transcription antitermination factor NusB
L2_037_000M1_scaffold_1286_11
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9807..11453
DNA (1647bp) protein (549aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z8B3_9CLOT
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CDD44543.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_037_000M1_scaffold_1286_12
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11753..11962
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7APR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44542.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_1286_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12028..12654
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZEJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44540.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_1286_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12831..13313
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z8B0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44538.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_1286_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13735..14076
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZVQ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45161.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_037_000M1_scaffold_1286_16
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14187..14576
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZQA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45514.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_1286_17
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14749..14865)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z681_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD43818.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_1286_18
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14879..16015)
DNA (1137bp) protein (379aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.3)
Sodium ion-translocating decarboxylase beta subunit n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZC85_9CLOT
Sodium ion-translocating decarboxylase beta subunit {ECO:0000313|EMBL:CDD43815.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_037_000M1_scaffold_1286_19
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16376..16765)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z676_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD43813.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_1286_20
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16841..17656)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZRV5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD43811.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_1286_21
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17670..18365)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZK61_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD43809.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_1286_22
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18322..19152)
DNA (831bp) protein (277aa)
Putative stage III sporulation protein AF n=1 Tax=Clostridium sp. M62/1 RepID=D4CDR2_9CLOT
Stage III sporulation protein AF (Spore_III_AF).
Putative stage III sporulation protein AF {ECO:0000313|EMBL:EFE12277.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_037_000M1_scaffold_1286_23
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19219..20427)
DNA (1209bp) protein (403aa)
Stage III sporulation protein AE (Spore_III_AE) n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZRU2_9CLOT
Stage III sporulation protein AE (Spore_III_AE) {ECO:0000313|EMBL:CDD43796.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Stage III sporulation protein AE (spore_III_AE).
L2_037_000M1_scaffold_1286_24
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20455..20841)
DNA (387bp) protein (129aa)
Putative stage III sporulation protein AD n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z638_9CLOT
Putative stage III sporulation protein AD {ECO:0000313|EMBL:CDD43768.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
stage III sporulation protein AD
L2_037_000M1_scaffold_1286_25
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21022..21255)
DNA (234bp) protein (78aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZRR0_9CLOT
Displaying 25 items

View Taxonomy