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L2_037_000M1_scaffold_1426

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_1426_1
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..238
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V3I7_CLOSS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK47316.1}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
L2_037_000M1_scaffold_1426_2
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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533..805
DNA (273bp) protein (91aa)
Putative sporulation protein YqfC n=1 Tax=Clostridium sp. CAG:149 RepID=R5M307_9CLOT
Putative sporulation protein YqfC {ECO:0000313|EMBL:CCY85928.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
hypothetical protein
L2_037_000M1_scaffold_1426_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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816..2036
DNA (1221bp) protein (407aa)
Putative sporulation protein YqfD n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z4S5_9CLOT
Putative sporulation protein YqfD {ECO:0000313|EMBL:CDD41235.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
sporulation protein YqfD
L2_037_000M1_scaffold_1426_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2045..3055
DNA (1011bp) protein (337aa)
Phosphate starvation-inducible protein PhoH predicted ATPase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCM1_9CLOT
Phosphate starvation-inducible protein PhoH predicted ATPase {ECO:0000313|EMBL:CDD41234.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Phosphate starvation-inducible protein PhoH, predicted ATPase
L2_037_000M1_scaffold_1426_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3045..3542
DNA (498bp) protein (166aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Endoribonuclease YbeY n=1 Tax=Clostridium sp. CAG:299 RepID=R7AF18_9CLOT
conserved hypothetical protein TIGR00043
L2_037_000M1_scaffold_1426_6
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3553..5490
DNA (1938bp) protein (646aa)
MATE domain protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCL6_9CLOT
MATE domain protein {ECO:0000313|EMBL:CDD41229.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Uncharacterized membrane protein, putative virulence factor
L2_037_000M1_scaffold_1426_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5549..6052
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AF14_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD41227.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_1426_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6174..7412
DNA (1239bp) protein (413aa)
Predicted flavoproteins n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCL0_9CLOT
Predicted flavoproteins {ECO:0000313|EMBL:CDD41224.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted flavoproteins
L2_037_000M1_scaffold_1426_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7416..9035
DNA (1620bp) protein (540aa)
Uncharacterized FAD-dependent dehydrogenases n=1 Tax=Clostridium sp. CAG:299 RepID=R6YYQ3_9CLOT
Uncharacterized FAD-dependent dehydrogenases {ECO:0000313|EMBL:CDD41223.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Uncharacterized FAD-dependent dehydrogenases
L2_037_000M1_scaffold_1426_10
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9077..9931
DNA (855bp) protein (285aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Clostridium sp. CAG:299 RepID=R7AF09_9CLOT
L2_037_000M1_scaffold_1426_11
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10003..10230
DNA (228bp) protein (76aa)
UPF0291 protein BN593_01599 n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZJR7_9CLOT
UPF0291 protein BN593_01599 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_1426_12
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10268..10864
DNA (597bp) protein (199aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5 10-methenyltetrahydrofolate synthetase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCK5_9CLOT
L2_037_000M1_scaffold_1426_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10857..12098
DNA (1242bp) protein (414aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Clostridium sp. CAG:299 RepID=R7AF03_9CLOT
L2_037_000M1_scaffold_1426_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12268..13719
DNA (1452bp) protein (484aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z4R0_9CLOT
tRNA-i(6)A37 thiotransferase enzyme MiaB
L2_037_000M1_scaffold_1426_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13732..15075
DNA (1344bp) protein (448aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCK2_9CLOT
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:CDD41214.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_1426_16
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15247..17910
DNA (2664bp) protein (888aa)
DNA mismatch repair protein MutS n=1 Tax=Clostridium sp. M62/1 RepID=D4CEV8_9CLOT
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
DNA mismatch repair protein MutS
L2_037_000M1_scaffold_1426_17
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17922..19568
DNA (1647bp) protein (549aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCJ5_9CLOT
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
DNA mismatch repair protein MutL
Displaying 17 items

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