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L2_037_000M1_scaffold_1523

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_1523_1
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(212..1153)
DNA (942bp) protein (314aa)
Inosine-uridine nucleoside N-ribohydrolase (EC:3.2.-.-)
Inosine-uridine nucleoside N-ribohydrolase n=1 Tax=Clostridium sp. CAG:149 RepID=R5M353_9CLOT
Inosine-uridine nucleoside N-ribohydrolase {ECO:0000313|EMBL:CCY85968.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L2_037_000M1_scaffold_1523_2
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1160..2521)
DNA (1362bp) protein (454aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CC07_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFE12753.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
ABC-type sugar transport system, periplasmic component
L2_037_000M1_scaffold_1523_3
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2649..3473)
DNA (825bp) protein (275aa)
ABC-type sugar transport system, permease component n=2 Tax=Clostridiales RepID=D4MPA9_9FIRM
ABC-type sugar transport system, permease component
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:CBL35595.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L2_037_000M1_scaffold_1523_4
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3470..4336)
DNA (867bp) protein (289aa)
ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5ML39_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CCY85971.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
ugpA2; sn-glycerol-3-phosphate transport system permease protein UgpA
L2_037_000M1_scaffold_1523_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4333..5169)
DNA (837bp) protein (279aa)
Cof-like hydrolase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZGC5_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:CDD42494.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
HAD-superfamily hydrolase, subfamily IIB
L2_037_000M1_scaffold_1523_6
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5386..6987)
DNA (1602bp) protein (534aa)
Transcriptional regulator AraC family n=1 Tax=Clostridium sp. CAG:299 RepID=R7AIW9_9CLOT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDD42497.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L2_037_000M1_scaffold_1523_7
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7227..7940
DNA (714bp) protein (238aa)
VTC domain protein n=2 Tax=Lachnospiraceae RepID=C9LBK4_BLAHA
VTC domain protein {ECO:0000313|EMBL:EEX20511.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
hypothetical protein
L2_037_000M1_scaffold_1523_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7979..8650
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GNY7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93535.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_037_000M1_scaffold_1523_9
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8651..9577
DNA (927bp) protein (309aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BB18_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:ERI69395.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L2_037_000M1_scaffold_1523_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9593..10261
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GNY9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93537.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_037_000M1_scaffold_1523_11
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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10328..10996
DNA (669bp) protein (223aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6NUH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG84668.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
putative RNA polymerase sigma-I factor
L2_037_000M1_scaffold_1523_12

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10989..12089
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=gut metagenome RepID=J9G6L7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJX02892.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
Rhs element Vgr family protein
L2_037_000M1_scaffold_1523_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12399..12800
DNA (402bp) protein (134aa)
Citrate transporter n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C782_CLOSY
Citrate transporter {ECO:0000313|EMBL:EGA95867.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
citrate transporter family protein
L2_037_000M1_scaffold_1523_14
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12800..13219
DNA (420bp) protein (140aa)
Citrate transporter n=3 Tax=Clostridium RepID=E7GH89_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05325.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
citrate transporter family protein
L2_037_000M1_scaffold_1523_15
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13232..13765
DNA (534bp) protein (178aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=U2DL15_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI80381.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L2_037_000M1_scaffold_1523_16
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14126..15226
DNA (1101bp) protein (367aa)
diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC:1.1.1.193)
Riboflavin biosynthesis protein RibD n=10 Tax=Firmicutes RepID=D4C6Q0_9CLOT
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_037_000M1_scaffold_1523_17
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15211..15846
DNA (636bp) protein (212aa)
riboflavin synthase, alpha subunit (EC:2.5.1.9)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EFP59733.1}; EC=2.5.1.9 {ECO:0000313|EMBL:EFP59733.1};; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
Riboflavin synthase, alpha subunit n=11 Tax=Firmicutes RepID=D4JCM0_9FIRM
L2_037_000M1_scaffold_1523_18
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15866..17071
DNA (1206bp) protein (402aa)
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:4.1.99.12)
Riboflavin biosynthesis protein RibBA n=12 Tax=Firmicutes RepID=D4JCL9_9FIRM
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L2_037_000M1_scaffold_1523_19
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17072..17539
DNA (468bp) protein (156aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.- 2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
6,7-dimethyl-8-ribityllumazine synthase n=11 Tax=Firmicutes RepID=D4JCL8_9FIRM
L2_037_000M1_scaffold_1523_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17706..17978
DNA (273bp) protein (91aa)
Resolvase, N-terminal domain protein n=2 Tax=Lachnospiraceae RepID=C9L6J5_BLAHA
Resolvase, N terminal domain protein {ECO:0000313|EMBL:EQJ62747.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
tndX; conjugative transposon site-specific recombinase
L2_037_000M1_scaffold_1523_21
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18025..18342
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GH88_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05324.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
Displaying 21 items

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