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L2_037_000M1_scaffold_156

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_156_1
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..770)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38711.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_156_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1083..1424
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z565_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38709.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_156_3
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1480..2886)
DNA (1407bp) protein (469aa)
Glutamine phosphoribosylpyrophosphate amidotransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Amidophosphoribosyltransferase n=3 Tax=Clostridium RepID=D6DEV4_CLOSC
L2_037_000M1_scaffold_156_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3054..3851)
DNA (798bp) protein (266aa)
Predicted DNA-binding proteins n=1 Tax=Clostridium sp. CAG:299 RepID=R6YRU0_9CLOT
UPF0251 protein BN593_01066 {ECO:0000256|HAMAP-Rule:MF_00674}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted DNA-binding proteins
L2_037_000M1_scaffold_156_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4084..5094
DNA (1011bp) protein (337aa)
Predicted xylanase/chitin deacetylase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCQ5_9CLOT
Predicted xylanase/chitin deacetylase {ECO:0000313|EMBL:CDD38701.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted xylanase/chitin deacetylase
L2_037_000M1_scaffold_156_6
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5157..5612)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YXQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38700.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Protein of unknown function (DUF2726).
L2_037_000M1_scaffold_156_7
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5688..5939
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RK39_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18499.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_037_000M1_scaffold_156_8
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6422..6631
DNA (210bp) protein (70aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=A8RK38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18498.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Predicted transcriptional regulator
L2_037_000M1_scaffold_156_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6698..9934
DNA (3237bp) protein (1079aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RK37_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18497.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Superfamily II DNA/RNA helicases, SNF2 family
L2_037_000M1_scaffold_156_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9956..10555
DNA (600bp) protein (200aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RK36_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18496.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_037_000M1_scaffold_156_11
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10574..11449
DNA (876bp) protein (292aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RK35_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18495.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
molecular chaperone Tir
L2_037_000M1_scaffold_156_12
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11442..13289
DNA (1848bp) protein (616aa)
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LPQ2_9FIRM
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EFU76150.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
type III restriction system methyltransferase
L2_037_000M1_scaffold_156_13
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13291..14340
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BIJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA63005.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
cytoplasmic protein
L2_037_000M1_scaffold_156_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14330..17476
DNA (3147bp) protein (1049aa)
Restriction endonuclease (EC:3.1.21.5)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RK32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18492.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L2_037_000M1_scaffold_156_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17567..17959)
DNA (393bp) protein (131aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8S331_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13306.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_037_000M1_scaffold_156_16
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18177..19127
DNA (951bp) protein (317aa)
Peptidase, S8/S53 family {ECO:0000313|EMBL:EFE11171.1}; EC=3.4.21.- {ECO:0000313|EMBL:EFE11171.1};; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Peptidase, S8/S53 family n=1 Tax=Clostridium sp. M62/1 RepID=D4CGS0_9CLOT
Subtilisin-like serine proteases
L2_037_000M1_scaffold_156_17
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19142..19960
DNA (819bp) protein (273aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7A7I1_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDD38697.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
beta-lactamase
L2_037_000M1_scaffold_156_18
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20069..20722)
DNA (654bp) protein (218aa)
K+ transport systems NAD-binding component n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCQ1_9CLOT
K+ transport systems NAD-binding component {ECO:0000313|EMBL:CDD38696.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
K+ transport systems, NAD-binding component
L2_037_000M1_scaffold_156_19
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20750..22096)
DNA (1347bp) protein (449aa)
Potassium uptake protein TrkH family n=1 Tax=Clostridium sp. CAG:299 RepID=R6YXQ5_9CLOT
Potassium uptake protein TrkH family {ECO:0000313|EMBL:CDD38695.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
potassium uptake protein, TrkH family
L2_037_000M1_scaffold_156_20
unknown

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22172..22273
DNA (102bp) protein (34aa)

This feature has no annotations

L2_037_000M1_scaffold_156_21
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22546..23619
DNA (1074bp) protein (358aa)
Protein RecA n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z553_9CLOT
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
protein RecA
L2_037_000M1_scaffold_156_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23622..24227
DNA (606bp) protein (202aa)
Regulatory protein RecX n=1 Tax=Clostridium sp. CAG:299 RepID=R6YRS8_9CLOT
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_156_23
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24340..25887
DNA (1548bp) protein (516aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Ribonuclease Y n=1 Tax=Clostridium sp. CAG:299 RepID=R7A7H7_9CLOT
metal dependent phosphohydrolase
L2_037_000M1_scaffold_156_24
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26096..26893
DNA (798bp) protein (266aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCP6_9CLOT
L2_037_000M1_scaffold_156_25
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26934..27524
DNA (591bp) protein (197aa)
Hydrolase NUDIX family n=1 Tax=Clostridium sp. CAG:299 RepID=R6YXQ0_9CLOT
Hydrolase NUDIX family {ECO:0000313|EMBL:CDD38690.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
NUDIX hydrolase
L2_037_000M1_scaffold_156_26
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27580..28143
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z550_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38689.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_156_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28343..29209
DNA (867bp) protein (289aa)
Tyrosine recombinase XerC n=1 Tax=Clostridium sp. CAG:299 RepID=R6YRS5_9CLOT
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
tyrosine recombinase XerD subunit
L2_037_000M1_scaffold_156_28
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29290..30312)
DNA (1023bp) protein (341aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Signal transduction histidine kinase n=2 Tax=Clostridium RepID=D6DEW9_CLOSC
Signal transduction histidine kinase
L2_037_000M1_scaffold_156_29
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30423..30986)
DNA (564bp) protein (188aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Clostridium sp. CAG:149 RepID=R5M6S9_9CLOT
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CCY85324.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_037_000M1_scaffold_156_30
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31186..32382
DNA (1197bp) protein (399aa)
RND family efflux transporter, MFP subunit n=2 Tax=Clostridium RepID=D6DEX2_CLOSC
RND family efflux transporter, MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EFE11149.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Displaying items 1-30 of 63 in total

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