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L2_037_000M1_scaffold_660

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_660_1
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..159)
DNA (159bp) protein (53aa)
Sporulation protein YlmC/YmxH family n=1 Tax=Clostridium sp. CAG:299 RepID=R7AP86_9CLOT
Sporulation protein YlmC/YmxH family {ECO:0000313|EMBL:CDD44407.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
sporulation protein, YlmC/YmxH family
L2_037_000M1_scaffold_660_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(363..1364)
DNA (1002bp) protein (334aa)
FAD binding domain protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z7U1_9CLOT
FAD binding domain protein {ECO:0000313|EMBL:CDD44408.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
FAD binding domain.
L2_037_000M1_scaffold_660_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1553..2956)
DNA (1404bp) protein (468aa)
dipeptidase, putative (EC:3.5.1.18)
Dipeptidase putative n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZLX7_9CLOT
Dipeptidase putative {ECO:0000313|EMBL:CDD44409.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_037_000M1_scaffold_660_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3021..3467)
DNA (447bp) protein (149aa)
Uncharacterized conserved protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZE43_9CLOT
Uncharacterized conserved protein {ECO:0000313|EMBL:CDD44410.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_660_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3493..5094)
DNA (1602bp) protein (534aa)
Peptide chain release factor 3 n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZTK6_9CLOT
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
peptide chain release factor 3
L2_037_000M1_scaffold_660_6
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5200..6132)
DNA (933bp) protein (311aa)
Esterase/lipase (EC:3.2.1.8)
Esterase/lipase n=1 Tax=Clostridium sp. CAG:299 RepID=R7AP93_9CLOT
Esterase/lipase {ECO:0000313|EMBL:CDD44412.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_037_000M1_scaffold_660_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6407..7183
DNA (777bp) protein (259aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z7U6_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
RNA polymerase, sigma subunit, RpsG/SigG
L2_037_000M1_scaffold_660_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7294..8034)
DNA (741bp) protein (247aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZLY1_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
RNA polymerase, sigma 29 subunit, SigE
L2_037_000M1_scaffold_660_9
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9339..10565)
DNA (1227bp) protein (409aa)
Cell division protein FtsZ n=1 Tax=Clostridium sp. CAG:149 RepID=R5LWH3_9CLOT
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
cell division protein FtsZ
L2_037_000M1_scaffold_660_10
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10731..11462)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZLZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44429.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Cell division septal protein
L2_037_000M1_scaffold_660_11
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11488..12765)
DNA (1278bp) protein (426aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZTM9_9CLOT
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L2_037_000M1_scaffold_660_12
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12919..14064)
DNA (1146bp) protein (382aa)
Bacterial cell division membrane protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7APC0_9CLOT
Bacterial cell division membrane protein {ECO:0000313|EMBL:CDD44432.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Bacterial cell division membrane protein
L2_037_000M1_scaffold_660_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14107..15456)
DNA (1350bp) protein (450aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZM03_9CLOT
L2_037_000M1_scaffold_660_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15470..16441)
DNA (972bp) protein (324aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZTN6_9CLOT
L2_037_000M1_scaffold_660_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16522..18255)
DNA (1734bp) protein (578aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Cell division protein FtsI/penicillin-binding protein 2 n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z7X3_9CLOT
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:CDD44438.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_037_000M1_scaffold_660_16
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18318..20537)
DNA (2220bp) protein (740aa)
Cell division protein FtsI/penicillin-binding protein 2 n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z7X3_9CLOT
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:CDD44438.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Cell division protein FtsI/penicillin-binding protein 2
L2_037_000M1_scaffold_660_17
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20515..21012)
DNA (498bp) protein (166aa)
Septum formation initiator n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZM09_9CLOT
Septum formation initiator {ECO:0000313|EMBL:CDD44439.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Septum formation initiator.
L2_037_000M1_scaffold_660_18
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21064..22008)
DNA (945bp) protein (315aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZTP2_9CLOT
L2_037_000M1_scaffold_660_19
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22005..22430)
DNA (426bp) protein (142aa)
Protein MraZ n=1 Tax=Clostridium sp. CAG:299 RepID=R7APD4_9CLOT
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
mraZ protein
L2_037_000M1_scaffold_660_20
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22651..22806)
DNA (156bp) protein (52aa)
Spo0E like sporulation regulatory protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z7X9_9CLOT
Spo0E like sporulation regulatory protein {ECO:0000313|EMBL:CDD44443.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Spo0E like sporulation regulatory protein.
L2_037_000M1_scaffold_660_21
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22809..23684)
DNA (876bp) protein (292aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZTP8_9CLOT
L2_037_000M1_scaffold_660_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23791..25125)
DNA (1335bp) protein (445aa)
Transporter n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z7Y6_9CLOT
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Na+-dependent transporters of the SNF family
L2_037_000M1_scaffold_660_23
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25355..26452
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZM19_9CLOT
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
GTP-binding protein YchF
L2_037_000M1_scaffold_660_24
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26589..26924)
DNA (336bp) protein (112aa)
UPF0473 protein BN593_02385 n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZTQ5_9CLOT
UPF0473 protein BN593_02385 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Protein of unknown function (DUF1292).
L2_037_000M1_scaffold_660_25
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26989..27621)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z7Z0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44453.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_660_26
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27668..28201)
DNA (534bp) protein (178aa)
ATP:corrinoid adenosyltransferase (EC:2.5.1.17)
ATP:corrinoid adenosyltransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZE95_9CLOT
ATP:corrinoid adenosyltransferase {ECO:0000313|EMBL:CDD44455.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_037_000M1_scaffold_660_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28207..30060)
DNA (1854bp) protein (618aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Superfamily I DNA and RNA helicases n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z823_9CLOT
L2_037_000M1_scaffold_660_28
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30183..31634)
DNA (1452bp) protein (484aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
glutamyl-tRNA synthetase, bacterial family (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZM54_9CLOT
L2_037_000M1_scaffold_660_29
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31732..33084)
DNA (1353bp) protein (451aa)
Magnesium transporter n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZEC8_9CLOT
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Mg2+ transporter (mgtE)
L2_037_000M1_scaffold_660_30
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33158..34198)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZTU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD44486.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
Displaying 30 items

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