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L2_037_000M1_scaffold_2200

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_2200_1
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1269
DNA (1269bp) protein (423aa)
Esterase/lipase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZRD1_9CLOT
Esterase/lipase {ECO:0000313|EMBL:CDD43606.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Esterase/lipase
L2_037_000M1_scaffold_2200_2
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1266..1745
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Clostridium sp. CAG:149 RepID=R5MLJ7_9CLOT
conserved hypothetical protein TIGR00246
L2_037_000M1_scaffold_2200_3
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1742..2347
DNA (606bp) protein (202aa)
Lysophospholipase L1 and related esterases (EC:3.1.1.2)
Lysophospholipase L1 and related esterases {ECO:0000313|EMBL:CBK78507.1}; EC=3.1.1.2 {ECO:0000313|EMBL:CBK78507.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Lysophospholipase L1 and related esterases n=2 Tax=Clostridium RepID=D6DLD3_CLOSC
L2_037_000M1_scaffold_2200_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2400..3428
DNA (1029bp) protein (343aa)
Transglutaminase-like superfamily n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z5L6_9CLOT
Transglutaminase-like superfamily {ECO:0000313|EMBL:CDD43553.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Transglutaminase-like superfamily.
L2_037_000M1_scaffold_2200_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3457..4749
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZR86_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD43551.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_2200_6
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5115..6248
DNA (1134bp) protein (378aa)
Glycine betaine/L-proline transport ATP binding subunit n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZJH2_9CLOT
Glycine betaine/L-proline transport ATP binding subunit {ECO:0000313|EMBL:CDD43549.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
glycine betaine/L-proline transport ATP binding subunit
L2_037_000M1_scaffold_2200_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6248..7837
DNA (1590bp) protein (530aa)
Periplasmic glycine betaine/choline-binding (Lipo)protein of an ABC-type transport system (Osmoprotectant binding protein) n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZR83_9CLOT
Periplasmic glycine betaine/choline-binding (Lipo)protein of an ABC-type transport system (Osmoprotectant binding protein) {ECO:0000313|EMBL:CDD43546.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
L2_037_000M1_scaffold_2200_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7972..8967
DNA (996bp) protein (332aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
tRNA-dihydrouridine synthase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z5K9_9CLOT
dihydrouridine synthase
L2_037_000M1_scaffold_2200_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8921..10198
DNA (1278bp) protein (426aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZR79_9CLOT
L2_037_000M1_scaffold_2200_10
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10327..11322
DNA (996bp) protein (332aa)
Stage III sporulation protein AA n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZJG2_9CLOT
Stage III sporulation protein AA {ECO:0000313|EMBL:CDD43539.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
stage III sporulation protein AA
L2_037_000M1_scaffold_2200_11
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11312..11833
DNA (522bp) protein (174aa)
Sporulation stage III protein AB n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z5K6_9CLOT
Sporulation stage III protein AB {ECO:0000313|EMBL:CDD43538.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
sporulation stage III protein AB
L2_037_000M1_scaffold_2200_12
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11885..12079
DNA (195bp) protein (65aa)
Stage III sporulation protein AC n=5 Tax=Clostridiales RepID=D4MSA7_9FIRM
stage III sporulation protein AC
Stage III sporulation protein AC {ECO:0000313|EMBL:CCY83224.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L2_037_000M1_scaffold_2200_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12115..12579
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZJF7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD43534.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_2200_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12646..13236)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7ALV2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD43532.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Displaying 14 items

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