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L2_037_000M1_scaffold_543_23

Organism: dasL2_037_000M1_concoct_51_fa

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 28256..31813

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 1185.0
  • Bit_score: 2043
  • Evalue 0.0
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 1185.0
  • Bit_score: 2043
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DH69_CLOSC similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 1185.0
  • Bit_score: 2043
  • Evalue 0.0

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Taxonomy

[Clostridium] saccharolyticum → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3558
ATGGGAACCATATTTGCCAATCCGCTGGAGGAGCTGGCTGAATTTCAGGATATGAATAAAGAGCTGAACGAGGGGCGGGGGCCTCTCCAGGTCAGCGGGTGCGTGGACTCACAGAAGGCTCACCTGATCAGCGAGACAGGAGGCGCGAAAAGGTGGAAGCTGATTGTCACATACGACGATTCCAGAGCCAGGGAGCTGTTTGAGGACTACAGAACCTTCGATCCGGCTGTGTATCTCTATCCGGCCAGAGACCTGCTGTTTTACAGCTCCGATATTCATGGAAATCTCCTGACCCGCCAGAGAATGCAGGTATTTAAAAGTCTCCTTGAAAATGAGACAGGAACGGTGGTGACTACAGCGGATGCCCTGATGGATCGCTTGCTTCCTCTGTCTGAAATCCAGAACAGCTGCGTCCGCGTGGCCTGCGGAGAGACAATTCTTCTGGAAAAGCTGAAGGGAAGGCTTTCCCAGCTGGGTTACGAGAGAGTGGGCCAGGTGGACGGCATGGGGCAGTTTTCCATCCGCGGAGGAATCATCGATATTTTCCCTCTGACAGAGGAGCTGCCCGTCCGAATCGAGCTGTGGGGCGACGAGGTGGACTCCATCCGGAGCTTTGACCTGGAAAGCCAGAGATCGGTGGAAGAGCTTCAGGAAGTCGCCCTCTACCCGGCTACAGAGCTTCTGCTTCTGCCGGAGCGGGTGGAGGAAGGCCTGAGGCAGATTGAGAAGGAGACCAAGGCCTATGCCAGGGCGCTGCGGGAACAGATGAAGACCGAGCAGGCGGCCAGGATAGAAGGAGCTGTGAGAGAGCTTTCCGAGGAGATTAAGGAAGGCTTCCGGGTTCACGGGCTGGGCGGCTTTATCCAATATTTTTCCGAGACCACGGTTTCCTTTCTGAATTATTTTCCCAAAGATCATCTGGCGGTTTTTCTGGATGAGCCGCTTAGAATCAAGGAAAAGGCTGAGGTGGTAGAGACGGAGTTCAGGGAGAGCATGGCCCACCGCCTGGAGGGAGGCTATCTGCTTCCCGGGCAGACGGATTTTCTCTATTCTGCCAAGGCTCTGCTGGCTATGACAGCCCTGCCCAGTACCCTGCTTCTCTCAGGCCTTGACCAGAAGCTTTCAGGCTTTCCGGTAAAGAAAAAGTACAGCATTGAGGCCAAGAGCATGGGGACCTATCACAATGGCTTTGAGCTCTTAATCAAGGATTTGGAGCGGTGGCAGAAGGGAAAATACAGGGTAGCTTTACTGACGGCTTCCCGAACCAGGGCCAGCCGTCTGGCAAATGATCTGAGAGAATATGGCCTGAAGGCCTACCTGCCGGATCAGGACTGCAGCCAGGTGAAGGCCGGAGAGATTATGGTTACCTATGGAAATCTCCACAGAGGCTTCGAGTATCCGCTGCTTAAATTTGCCGTTGTCACAGAAGGAGACATGTTTGGAAACGGCCAGGGCAAAAAGAGGAAAAAGAAGAAGACGTCCTACCAGGGCAGACATATCCAGAGCTTTTCCGAGCTGTCGCCGGGAGATTATGTGGTTCATGAAAACCACGGTCTCGGCATTTACCGCGGAATTGAAAAGATTGAGCAGGACAAGGTAGTCAAGGACTACATTAAAATCGAGTATGCGGACGGGGGCAATCTGTACCTGCCGGCCACAAAGCTGGAGGGAATCCAGAAATATGCCGGCGCGGAGGCGAAAAAGCCCAAGCTGAACCGCCTGGGGGGAAGCGAGTGGCACAAGACCAAGACGAGAGTCAGGGGAGCGGTCCGGGAGATTGCCAAGGATCTGGTGAAACTGTACGCGGCCCGGCAGGATCAGGAAGGATTTCAGTACGGGCCAGATACGGTGTGGCAGCGGGAATTTGAAGAAATGTTCCCCTACGAGGAGACGGAGGATCAGCTGGACGCCATCGACGCAGTGAAGCGGGACATGGAGAGCCGGAAGATCATGGATCGCCTGATCTGCGGGGACGTAGGCTACGGAAAGACGGAGATTGCCCTGCGGGCGGCGTTTAAGGCCATCCAGGAGGGAAAGCAGGTAGTATATCTGGTACCCACTACGATTTTAGCCCAGCAGCATTACAATACCTTTGTCCAGAGAATGAAGGATTTTCCGGTGCGGGTGGATATGATGTCGCGGTTCCGCACCCCCGCCGAGCAGAAAAAAACGCTGGAAGATTTGAAAAAGGGTCTGGTGGACGTGCTCATCGGAACTCACCGGGTGCTGTCAAAGGATGTGGAATTTAAGAGCCTGGGACTTTTAATTATCGACGAGGAGCAGCGGTTTGGCGTGGCCCACAAGGAGAAGATCAAGCAGCTGAAGGAAAATGTGGACGTCATTACCCTGACGGCTACCCCGATTCCCAGGACGCTTCACATGAGCCTCATAGGAATCCGCGATATGAGCGTGCTGGAGGAACCTCCGGTGGACCGCCTTCCCATCCAGACCTATGTGATGGAGTACAACGATGAGATGGTAAGAGAGGCCATCAGCCGCGAGGTGGCCAGAGGGGGACAGGTGTATTATGTATACAACCGTGTCAACAACATCGAGGAGATTGCCGGCCATGTGGCGGCTCTCGTTCCGGACGCTTCTGTTACCTTCGCCCACGGCCAGATGCGGGAGCACGAGTTGGAACGGATTATGCTGGACTTTGTAAACGGAGAGATTGACGTTCTGGTTTCCACTACCATCATTGAGACGGGCTTAAATATCCCCAATGCCAACACGATTATCATTCACGACGCGGATCGGCTGGGCCTGTCTCAGCTTTACCAGATCCGGGGACGCGTGGGGCGCTCTAACCGGACCGCTTACGCCTTTCTGATGTATCGGAGAGATAAGCTCCTCAGGGAGGAGGCGGAAAAGCGTCTTCAGGCAATCCGGGAATTTACGGAGCTTGGAAGCGGAATCAAGATTGCCATGCGGGATCTGGAGATCCGGGGCGCAGGCAATATTTTGGGGGCAGAGCAGCACGGCCATATGGAGGCGGTGGGCTACGATTTGTACTGCAAGCTGTTAAATGAGGCAGTGCTGGCCTTAAAGGGAGAGACGGATGAAAGCCAGGAGTTTGAAACCTCCGTGGACTGCGACATCGACGCCTACATTCCGCCCTCTTATATTAAAAATGAATATCAGAAGCTGGATATTTACAAGAGAATTTCCGCCATCGAGTCGGAGGAGGAGTACATGGATATGCAGGATGAGCTGATTGACCGGTTCGGAGAGCTTCCTGCTCCGGTGGAAAATCTGCTTTTGATTGCTTCTGTGAAGGCCCTGGCTCACAGCACCGGGGTGACGGAGGTGAATATCAACCGGCAGGAGGCCAGAATTACCATGTTCAGGCAGGCCAGAATCGACGTGACAGGCATTCCAGAGCTGATCAGCCGCTATCGGGGCGATTTAAAGCTGCGGCCGGGCGATGCGCCGGAATTTATGTACCTGGATCAGCGGAATAAAAATAAGGACTGCCAGCGGATGATAGAAAAAACGCAGGAAATTCTGAGAGGCCTGAAGGAGCTTAGCGGGCGCAGCCAGGACGCAGGCAGGAAATAA
PROTEIN sequence
Length: 1186
MGTIFANPLEELAEFQDMNKELNEGRGPLQVSGCVDSQKAHLISETGGAKRWKLIVTYDDSRARELFEDYRTFDPAVYLYPARDLLFYSSDIHGNLLTRQRMQVFKSLLENETGTVVTTADALMDRLLPLSEIQNSCVRVACGETILLEKLKGRLSQLGYERVGQVDGMGQFSIRGGIIDIFPLTEELPVRIELWGDEVDSIRSFDLESQRSVEELQEVALYPATELLLLPERVEEGLRQIEKETKAYARALREQMKTEQAARIEGAVRELSEEIKEGFRVHGLGGFIQYFSETTVSFLNYFPKDHLAVFLDEPLRIKEKAEVVETEFRESMAHRLEGGYLLPGQTDFLYSAKALLAMTALPSTLLLSGLDQKLSGFPVKKKYSIEAKSMGTYHNGFELLIKDLERWQKGKYRVALLTASRTRASRLANDLREYGLKAYLPDQDCSQVKAGEIMVTYGNLHRGFEYPLLKFAVVTEGDMFGNGQGKKRKKKKTSYQGRHIQSFSELSPGDYVVHENHGLGIYRGIEKIEQDKVVKDYIKIEYADGGNLYLPATKLEGIQKYAGAEAKKPKLNRLGGSEWHKTKTRVRGAVREIAKDLVKLYAARQDQEGFQYGPDTVWQREFEEMFPYEETEDQLDAIDAVKRDMESRKIMDRLICGDVGYGKTEIALRAAFKAIQEGKQVVYLVPTTILAQQHYNTFVQRMKDFPVRVDMMSRFRTPAEQKKTLEDLKKGLVDVLIGTHRVLSKDVEFKSLGLLIIDEEQRFGVAHKEKIKQLKENVDVITLTATPIPRTLHMSLIGIRDMSVLEEPPVDRLPIQTYVMEYNDEMVREAISREVARGGQVYYVYNRVNNIEEIAGHVAALVPDASVTFAHGQMREHELERIMLDFVNGEIDVLVSTTIIETGLNIPNANTIIIHDADRLGLSQLYQIRGRVGRSNRTAYAFLMYRRDKLLREEAEKRLQAIREFTELGSGIKIAMRDLEIRGAGNILGAEQHGHMEAVGYDLYCKLLNEAVLALKGETDESQEFETSVDCDIDAYIPPSYIKNEYQKLDIYKRISAIESEEEYMDMQDELIDRFGELPAPVENLLLIASVKALAHSTGVTEVNINRQEARITMFRQARIDVTGIPELISRYRGDLKLRPGDAPEFMYLDQRNKNKDCQRMIEKTQEILRGLKELSGRSQDAGRK*