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L2_037_000M1_scaffold_543

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_037_000M1_scaffold_543_1
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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190..1800
DNA (1611bp) protein (537aa)
O-antigen polymerase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZBT0_9CLOT
O-antigen polymerase {ECO:0000313|EMBL:CDD38376.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
O-Antigen ligase.
L2_037_000M1_scaffold_543_2
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1836..3674
DNA (1839bp) protein (613aa)
Polysaccharide biosynthesis protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7A6I5_9CLOT
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDD38377.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted nucleoside-diphosphate sugar epimerases
L2_037_000M1_scaffold_543_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3691..4245)
DNA (555bp) protein (185aa)
Acetyltransferase (GNAT) family n=1 Tax=Clostridium sp. CAG:299 RepID=R6YQW8_9CLOT
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:CDD38378.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Acetyltransferase (GNAT) family.
L2_037_000M1_scaffold_543_4
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4391..5404
DNA (1014bp) protein (338aa)
Site-specific recombinase XerD n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZBT6_9CLOT
Site-specific recombinase XerD {ECO:0000313|EMBL:CDD38381.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Site-specific recombinase XerD
L2_037_000M1_scaffold_543_5
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5446..6897
DNA (1452bp) protein (484aa)
Chain length determinant protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YQX3_9CLOT
Chain length determinant protein {ECO:0000313|EMBL:CDD38383.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_543_6
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7041..7208
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YWS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38385.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_543_7
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7379..7777)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7A6J6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38387.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_543_8
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8064..9395)
DNA (1332bp) protein (444aa)
Putative cell wall binding repeat n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z488_9CLOT
Putative cell wall binding repeat {ECO:0000313|EMBL:CDD38389.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Putative cell wall binding repeat.
L2_037_000M1_scaffold_543_9
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9540..11171)
DNA (1632bp) protein (544aa)
Isopropylmalate/homocitrate/citramalate synthases (EC:4.1.3.39)
HMGL-like protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7A6K1_9CLOT
HMGL-like protein {ECO:0000313|EMBL:CDD38392.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_037_000M1_scaffold_543_10
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11176..11844)
DNA (669bp) protein (223aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED (EC:3.1.3.18)
HAD hydrolase family IA variant 3 n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZBV0_9CLOT
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CDD38396.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_037_000M1_scaffold_543_11
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11817..12608)
DNA (792bp) protein (264aa)
CMP-2-keto-3-deoxyoctulosonic acid synthetase (EC:2.7.7.38)
Putative 3-deoxy-D-manno-octulosonate cytidylyltransferase n=1 Tax=Clostridium sp. M62/1 RepID=D4CDJ0_9CLOT
Putative 3-deoxy-D-manno-octulosonate cytidylyltransferase {ECO:0000313|EMBL:EFE12205.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_037_000M1_scaffold_543_12
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12853..14778
DNA (1926bp) protein (642aa)
Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] (EC:2.2.1.6)
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein n=2 Tax=Clostridium RepID=D4CDI9_9CLOT
Thiamine pyrophosphate enzyme N-terminal TPP binding domain protein {ECO:0000313|EMBL:CCY86068.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L2_037_000M1_scaffold_543_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14801..15742
DNA (942bp) protein (314aa)
Nucleoside-diphosphate-sugar epimerases n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZFL6_9CLOT
Nucleoside-diphosphate-sugar epimerases {ECO:0000313|EMBL:CDD39791.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Nucleoside-diphosphate-sugar epimerases
L2_037_000M1_scaffold_543_14
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15862..16914
DNA (1053bp) protein (351aa)
Glycosyltransferases involved in cell wall biogenesis (EC:2.4.1.83)
Glycosyltransferase group 2 family protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YUW6_9CLOT
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDD39793.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
L2_037_000M1_scaffold_543_15
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16911..19097
DNA (2187bp) protein (729aa)
Predicted glycosyltransferases n=1 Tax=Clostridium sp. CAG:299 RepID=R7AAP4_9CLOT
Predicted glycosyltransferases {ECO:0000313|EMBL:CDD39797.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted glycosyltransferases
L2_037_000M1_scaffold_543_16
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19138..20133
DNA (996bp) protein (332aa)
Predicted glycosyltransferases n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z8B9_9CLOT
Predicted glycosyltransferases {ECO:0000313|EMBL:CDD39799.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted glycosyltransferases
L2_037_000M1_scaffold_543_17
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20183..22357
DNA (2175bp) protein (725aa)
Cell envelope-related function transcriptional attenuator common domain n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z0R9_9CLOT
Cell envelope-related function transcriptional attenuator common domain {ECO:0000313|EMBL:CDD39800.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
cell envelope-related function transcriptional attenuator common domain
L2_037_000M1_scaffold_543_18
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22403..23821
DNA (1419bp) protein (473aa)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YUX6_9CLOT
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:CDD39803.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Undecaprenyl-phosphate glucose phosphotransferase
L2_037_000M1_scaffold_543_19
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23836..25761
DNA (1926bp) protein (642aa)
Cell envelope-related function transcriptional attenuator common domain n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DEL0_CLOSC
cell envelope-related function transcriptional attenuator common domain
Cell envelope-related function transcriptional attenuator common domain {ECO:0000313|EMBL:CBK76134.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_037_000M1_scaffold_543_20
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25942..26820
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZCM2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38661.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Predicted transcriptional regulators
L2_037_000M1_scaffold_543_21
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27044..27274
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z521_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38659.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_543_22
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27466..28161
DNA (696bp) protein (232aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YRQ1_9CLOT
L2_037_000M1_scaffold_543_23
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28256..31813
DNA (3558bp) protein (1186aa)
transcription-repair coupling factor (EC:3.6.1.-)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Transcription-repair-coupling factor n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DH69_CLOSC
L2_037_000M1_scaffold_543_24
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31920..32678
DNA (759bp) protein (253aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ribosomal large subunit pseudouridine synthase F (EC:5.4.99.12 5.4.99.-)
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:299 RepID=R6YRP7_9CLOT
L2_037_000M1_scaffold_543_25
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32757..33581)
DNA (825bp) protein (275aa)
4Fe-4S binding domain protein n=3 Tax=Clostridium RepID=D4CDH9_9CLOT
hypothetical protein
4Fe-4S binding domain protein {ECO:0000313|EMBL:EFE12194.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_037_000M1_scaffold_543_26
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33683..34243)
DNA (561bp) protein (187aa)
Nitroreductase n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z4Z6_9CLOT
Nitroreductase {ECO:0000313|EMBL:CDD38629.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Nitroreductase
L2_037_000M1_scaffold_543_27
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34343..34906)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6YRM2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD38628.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L2_037_000M1_scaffold_543_28
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35173..36441
DNA (1269bp) protein (423aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DH85_CLOSC
23S rRNA (uracil-5-)-methyltransferase RumA
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CBK77059.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L2_037_000M1_scaffold_543_29
Bifidobacterium boum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36755..37027
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M648_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KFI48423.1}; TaxID=78343 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium boum.;"
hypothetical protein
L2_037_000M1_scaffold_543_30
unknown

Not on your lists

37040..37255
DNA (216bp) protein (72aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

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