ggKbase home page

L2_037_000M1_scaffold_612_2

Organism: dasL2_037_000M1_concoct_51_fa

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 324..893

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZBH3_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 163.0
  • Bit_score: 320
  • Evalue 1.00e-84
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 163.0
  • Bit_score: 320
  • Evalue 1.50e-84
RNA polymerase, sigma subunit, SigV similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 160.0
  • Bit_score: 166
  • Evalue 4.20e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:299 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 570
TTGTTCCGCTTATCATCTGTAATACTAGAAGGAATAGAGACAGAAACCGATGGAATGGAAATTAGAAAGGCAGAGAGCATGGAACAGAAGCTATATGACAGCGTGGCTGCCTACATTATAGAGAACCAAAACAGATTTTACCGTCTGGCCTACAGCTATGTAGGGGACAGGGAGGCTGCTCTTGATGTGGTGCAGAACGCGATTTTGAAGGGACTTGAAAAATGCGATACCCTTCGCAATCAGGACGCAGTAAAGACATGGTTTTACAGGATTGTAGTCAATGAAGCGCTTCAGATTCTGAGGGCAAGAAAAAGAGAAGAGCTTTCAGCAGATGGGGAAGTGTTTGAGCAGGCGTACACAGAACCGGCTTATGACAGGGAGCGGGAGGTCTATGAGGCAGTGAGGAATCTGCCGGATCCAGGCCGCACCGTTGTCATTCTTCATTATTATGAGGATTTAACGCTGAAGCAGATTGCAGAGATTACGGATGTAAACCTGAATACAGTGAAATACAGGCTGTATTCATCGCTGGAGCGTCTGAAAAAAAGATTAAAGGAGGAAGCGCTATGA
PROTEIN sequence
Length: 190
LFRLSSVILEGIETETDGMEIRKAESMEQKLYDSVAAYIIENQNRFYRLAYSYVGDREAALDVVQNAILKGLEKCDTLRNQDAVKTWFYRIVVNEALQILRARKREELSADGEVFEQAYTEPAYDREREVYEAVRNLPDPGRTVVILHYYEDLTLKQIAEITDVNLNTVKYRLYSSLERLKKRLKEEAL*